Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SSBP1Q04837 HNF1A-211ENST00000543427 2819 ntTSL 5 BASIC13.91□□□□□ -0.18
SSBP1Q04837 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.91□□□□□ -0.18
SSBP1Q04837 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 ITGB7-201ENST00000267082 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC13.9□□□□□ -0.18
SSBP1Q04837 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC13.9□□□□□ -0.18
SSBP1Q04837 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC13.9□□□□□ -0.18
SSBP1Q04837 TMEM191A-211ENST00000637163 1067 ntBASIC13.9□□□□□ -0.18
SSBP1Q04837 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP1Q04837 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC13.9□□□□□ -0.18
SSBP1Q04837 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC13.9□□□□□ -0.18
SSBP1Q04837 AC005622.1-201ENST00000636801 1703 ntBASIC13.9□□□□□ -0.18
SSBP1Q04837 AC079776.2-201ENST00000641154 1609 ntBASIC13.9□□□□□ -0.19
SSBP1Q04837 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 TLE3-223ENST00000560939 3021 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.89□□□□□ -0.19
SSBP1Q04837 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AL353732.1-201ENST00000569618 1459 ntBASIC13.89□□□□□ -0.19
SSBP1Q04837 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
SSBP1Q04837 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 PRYP5-201ENST00000451909 266 ntBASIC13.89□□□□□ -0.19
SSBP1Q04837 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 KRT8P26-201ENST00000534154 1276 ntBASIC13.89□□□□□ -0.19
SSBP1Q04837 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC13.89□□□□□ -0.19
SSBP1Q04837 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
SSBP1Q04837 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SSBP1Q04837 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SSBP1Q04837 NCF1C-201ENST00000438382 1427 ntBASIC13.89□□□□□ -0.19
SSBP1Q04837 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP1Q04837 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms