Protein–RNA interactions for Protein: Q00587

CDC42EP1, Cdc42 effector protein 1, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1Q00587 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 AC114501.2-201ENST00000439631 535 ntBASIC17.75■□□□□ 0.43
CDC42EP1Q00587 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 TMEM176B-206ENST00000492607 1265 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 AL512361.1-201ENST00000554200 418 ntBASIC17.75■□□□□ 0.43
CDC42EP1Q00587 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 TEX48-202ENST00000612244 662 ntTSL 3 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 FZD10-202ENST00000539839 3282 ntBASIC17.75■□□□□ 0.43
CDC42EP1Q00587 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 TDG-209ENST00000544861 1387 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 ME2P1-201ENST00000426028 1970 ntBASIC17.75■□□□□ 0.43
CDC42EP1Q00587 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.75■□□□□ 0.43
CDC42EP1Q00587 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 AL691432.1-201ENST00000596308 1422 ntBASIC17.74■□□□□ 0.43
CDC42EP1Q00587 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 FXR1-221ENST00000491674 365 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 SUOX-214ENST00000551841 906 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 SPDYE22P-201ENST00000582158 798 ntBASIC17.74■□□□□ 0.43
CDC42EP1Q00587 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 CYP4F24P-201ENST00000586049 1580 ntBASIC17.74■□□□□ 0.43
CDC42EP1Q00587 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.74■□□□□ 0.43
CDC42EP1Q00587 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 AC087499.6-201ENST00000411576 835 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 MEP1AP4-201ENST00000423244 1087 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 RNA5-8SN1-201ENST00000610460 153 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.73■□□□□ 0.43
CDC42EP1Q00587 RNA5-8SN5-202ENST00000612463 153 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 RNA5-8SN4-201ENST00000613359 153 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 AL662799.1-202ENST00000614205 422 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 5S_rRNA.22-201ENST00000614916 106 ntBASIC17.73■□□□□ 0.43
CDC42EP1Q00587 RNA5-8SN5-201ENST00000619471 153 ntBASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms