Protein–RNA interactions for Protein: Q00532

CDKL1, Cyclin-dependent kinase-like 1, humanhuman

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1Q00532 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDKL1Q00532 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.17■□□□□ 0.18
CDKL1Q00532 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
CDKL1Q00532 CRCP-205ENST00000431089 942 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 FDX1P1-201ENST00000449115 551 ntBASIC16.17■□□□□ 0.18
CDKL1Q00532 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.17■□□□□ 0.18
CDKL1Q00532 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.17■□□□□ 0.18
CDKL1Q00532 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.17■□□□□ 0.18
CDKL1Q00532 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.17■□□□□ 0.18
CDKL1Q00532 AC034105.1-201ENST00000563488 319 ntBASIC16.17■□□□□ 0.18
CDKL1Q00532 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
CDKL1Q00532 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.17■□□□□ 0.18
CDKL1Q00532 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 COL26A1-203ENST00000613501 2970 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
CDKL1Q00532 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.16■□□□□ 0.18
CDKL1Q00532 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDKL1Q00532 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.16■□□□□ 0.18
CDKL1Q00532 DIABLO-208ENST00000464942 2569 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 AC109635.5-201ENST00000533593 962 ntBASIC16.16■□□□□ 0.18
CDKL1Q00532 AC023141.13-201ENST00000604991 943 ntBASIC16.16■□□□□ 0.18
CDKL1Q00532 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
CDKL1Q00532 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
CDKL1Q00532 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC16.16■□□□□ 0.18
CDKL1Q00532 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
CDKL1Q00532 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
CDKL1Q00532 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKL1Q00532 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 FALEC-201ENST00000416894 566 ntTSL 3 BASIC16.15■□□□□ 0.18
CDKL1Q00532 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC16.15■□□□□ 0.18
CDKL1Q00532 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC16.15■□□□□ 0.18
CDKL1Q00532 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.15■□□□□ 0.18
CDKL1Q00532 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
CDKL1Q00532 AC104109.2-201ENST00000602919 1418 ntBASIC16.15■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms