Protein–RNA interactions for Protein: P60709

ACTB, Actin, cytoplasmic 1, humanhuman

Predictions only

Length 375 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTBP60709 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC14.16□□□□□ -0.14
ACTBP60709 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ACTBP60709 UPK3BP1-201ENST00000428678 509 ntBASIC14.16□□□□□ -0.14
ACTBP60709 ATP5G2P1-201ENST00000433580 426 ntBASIC14.16□□□□□ -0.14
ACTBP60709 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC14.16□□□□□ -0.14
ACTBP60709 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC14.16□□□□□ -0.14
ACTBP60709 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 AC092119.3-201ENST00000612618 583 ntBASIC14.16□□□□□ -0.14
ACTBP60709 NPAP1P7-201ENST00000613027 823 ntBASIC14.16□□□□□ -0.14
ACTBP60709 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
ACTBP60709 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 PRAL-201ENST00000624952 3286 ntBASIC14.16□□□□□ -0.14
ACTBP60709 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 SYNE3-203ENST00000554873 2826 ntTSL 5 BASIC14.16□□□□□ -0.14
ACTBP60709 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
ACTBP60709 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC14.16□□□□□ -0.14
ACTBP60709 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ACTBP60709 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 LINC01144-201ENST00000626198 1710 ntBASIC14.15□□□□□ -0.14
ACTBP60709 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 SUCO-210ENST00000616058 5495 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 REXO1L8P-201ENST00000604378 1897 ntBASIC14.15□□□□□ -0.14
ACTBP60709 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 MIR648-201ENST00000385046 94 ntBASIC14.15□□□□□ -0.14
ACTBP60709 KRT17P6-201ENST00000453795 1220 ntBASIC14.15□□□□□ -0.14
ACTBP60709 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 AC104819.1-201ENST00000504587 486 ntBASIC14.15□□□□□ -0.14
ACTBP60709 AP000867.3-201ENST00000524675 377 ntBASIC14.15□□□□□ -0.14
ACTBP60709 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC14.15□□□□□ -0.14
ACTBP60709 AC074051.2-201ENST00000565115 352 ntBASIC14.15□□□□□ -0.14
ACTBP60709 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 MIR3180-1-201ENST00000580374 94 ntBASIC14.15□□□□□ -0.14
ACTBP60709 MIR3180-3-201ENST00000584616 94 ntBASIC14.15□□□□□ -0.14
ACTBP60709 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 AC092329.2-201ENST00000598402 547 ntBASIC14.15□□□□□ -0.14
ACTBP60709 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
ACTBP60709 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 LINC02228-204ENST00000642115 2962 ntBASIC14.15□□□□□ -0.14
ACTBP60709 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
ACTBP60709 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
ACTBP60709 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC14.15□□□□□ -0.14
ACTBP60709 PPT1-215ENST00000641471 2368 ntBASIC14.15□□□□□ -0.14
ACTBP60709 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC14.15□□□□□ -0.15
ACTBP60709 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.15□□□□□ -0.15
ACTBP60709 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
ACTBP60709 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.14□□□□□ -0.15
ACTBP60709 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
ACTBP60709 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC14.14□□□□□ -0.15
ACTBP60709 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 47 ms