Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.71■□□□□ 0.11
VSX2P58304 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
VSX2P58304 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.11
VSX2P58304 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC15.71■□□□□ 0.11
VSX2P58304 HNRNPFP1-201ENST00000391730 1133 ntBASIC15.71■□□□□ 0.11
VSX2P58304 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC15.71■□□□□ 0.11
VSX2P58304 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC15.71■□□□□ 0.11
VSX2P58304 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.71■□□□□ 0.11
VSX2P58304 HLA-J-203ENST00000494367 1087 ntBASIC15.71■□□□□ 0.11
VSX2P58304 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC15.71■□□□□ 0.11
VSX2P58304 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC15.71■□□□□ 0.11
VSX2P58304 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC15.71■□□□□ 0.11
VSX2P58304 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
VSX2P58304 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC15.71■□□□□ 0.11
VSX2P58304 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC15.71■□□□□ 0.11
VSX2P58304 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
VSX2P58304 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
VSX2P58304 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VSX2P58304 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VSX2P58304 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
VSX2P58304 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC15.7■□□□□ 0.1
VSX2P58304 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC15.7■□□□□ 0.1
VSX2P58304 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
VSX2P58304 AC073389.1-201ENST00000595595 795 ntBASIC15.7■□□□□ 0.1
VSX2P58304 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 AC084121.4-201ENST00000641598 221 ntBASIC15.7■□□□□ 0.1
VSX2P58304 AF228730.8-201ENST00000642140 221 ntBASIC15.7■□□□□ 0.1
VSX2P58304 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
VSX2P58304 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
VSX2P58304 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
VSX2P58304 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 ADARB1-202ENST00000360697 6604 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
VSX2P58304 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
VSX2P58304 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
VSX2P58304 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
VSX2P58304 RPL30-202ENST00000396070 440 ntTSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms