Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 AC138649.4-201ENST00000612222 287 ntBASIC12.01□□□□□ -0.49
APOC4P55056 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 TMEM25-202ENST00000354064 1965 ntTSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 AC106820.2-201ENST00000563775 3264 ntBASIC12.01□□□□□ -0.49
APOC4P55056 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
APOC4P55056 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
APOC4P55056 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC12.01□□□□□ -0.49
APOC4P55056 AC105020.1-201ENST00000435356 2205 ntBASIC12.01□□□□□ -0.49
APOC4P55056 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
APOC4P55056 MLLT6-211ENST00000621332 7578 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 U82695.1-201ENST00000635752 1889 ntBASIC12□□□□□ -0.49
APOC4P55056 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC12□□□□□ -0.49
APOC4P55056 WDR53-203ENST00000429115 683 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC12□□□□□ -0.49
APOC4P55056 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12□□□□□ -0.49
APOC4P55056 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC12□□□□□ -0.49
APOC4P55056 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 FHL2-212ENST00000607522 759 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC12□□□□□ -0.49
APOC4P55056 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
APOC4P55056 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC12□□□□□ -0.49
APOC4P55056 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC12□□□□□ -0.49
APOC4P55056 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
APOC4P55056 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
APOC4P55056 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
APOC4P55056 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 RPS19-201ENST00000221975 500 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC4P55056 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 CENPM-205ENST00000404067 905 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC4P55056 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC4P55056 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC4P55056 TREML5P-201ENST00000421694 576 ntBASIC11.99□□□□□ -0.49
APOC4P55056 FAM8A3P-201ENST00000427218 844 ntBASIC11.99□□□□□ -0.49
APOC4P55056 AL589923.1-201ENST00000441473 316 ntTSL 5 BASIC11.99□□□□□ -0.49
APOC4P55056 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC11.99□□□□□ -0.49
APOC4P55056 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 AQP6-203ENST00000551733 849 ntTSL 3 BASIC11.99□□□□□ -0.49
APOC4P55056 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
APOC4P55056 AL096865.1-201ENST00000606796 927 ntBASIC11.99□□□□□ -0.49
APOC4P55056 AL365330.1-201ENST00000607459 531 ntBASIC11.99□□□□□ -0.49
APOC4P55056 AL390754.1-201ENST00000619088 582 ntBASIC11.99□□□□□ -0.49
APOC4P55056 AC073592.8-201ENST00000624126 511 ntBASIC11.99□□□□□ -0.49
APOC4P55056 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
APOC4P55056 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms