Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HCFC1P51610 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
HCFC1P51610 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC14.18□□□□□ -0.14
HCFC1P51610 SERBP1P3-201ENST00000459980 809 ntBASIC14.18□□□□□ -0.14
HCFC1P51610 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.18□□□□□ -0.14
HCFC1P51610 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
HCFC1P51610 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 WFDC1-204ENST00000613603 549 ntBASIC14.18□□□□□ -0.14
HCFC1P51610 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC14.18□□□□□ -0.14
HCFC1P51610 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC14.18□□□□□ -0.14
HCFC1P51610 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
HCFC1P51610 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.17□□□□□ -0.14
HCFC1P51610 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 AC011495.1-201ENST00000498085 584 ntBASIC14.17□□□□□ -0.14
HCFC1P51610 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC14.17□□□□□ -0.14
HCFC1P51610 AL139011.1-202ENST00000642063 584 ntBASIC14.17□□□□□ -0.14
HCFC1P51610 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
HCFC1P51610 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HCFC1P51610 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC14.17□□□□□ -0.14
HCFC1P51610 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 HIST1H2BPS3-201ENST00000419683 341 ntBASIC14.17□□□□□ -0.14
HCFC1P51610 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC14.17□□□□□ -0.14
HCFC1P51610 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.17□□□□□ -0.14
HCFC1P51610 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 MIR4259-201ENST00000584466 101 ntBASIC14.17□□□□□ -0.14
HCFC1P51610 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.17□□□□□ -0.14
HCFC1P51610 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
HCFC1P51610 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
HCFC1P51610 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
HCFC1P51610 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC14.17□□□□□ -0.14
HCFC1P51610 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC14.16□□□□□ -0.14
HCFC1P51610 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.16□□□□□ -0.14
HCFC1P51610 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.16□□□□□ -0.14
HCFC1P51610 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
HCFC1P51610 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC14.16□□□□□ -0.14
HCFC1P51610 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
HCFC1P51610 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.16□□□□□ -0.14
HCFC1P51610 MYCLP2-201ENST00000449268 967 ntBASIC14.16□□□□□ -0.14
HCFC1P51610 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC14.16□□□□□ -0.14
HCFC1P51610 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms