Protein–RNA interactions for Protein: P50607

TUB, Tubby protein homolog, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBP50607 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TUBP50607 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 CNN2P2-201ENST00000443536 909 ntBASIC17.3■□□□□ 0.36
TUBP50607 CNN2P3-201ENST00000450201 906 ntBASIC17.3■□□□□ 0.36
TUBP50607 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBP50607 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.3■□□□□ 0.36
TUBP50607 AL136317.3-201ENST00000618497 906 ntBASIC17.3■□□□□ 0.36
TUBP50607 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBP50607 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBP50607 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBP50607 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBP50607 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 INHBB-201ENST00000295228 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.3■□□□□ 0.36
TUBP50607 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.3■□□□□ 0.36
TUBP50607 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TUBP50607 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBP50607 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.29■□□□□ 0.36
TUBP50607 HMGN1P19-201ENST00000436976 333 ntBASIC17.29■□□□□ 0.36
TUBP50607 RBPMS2P1-201ENST00000437762 623 ntBASIC17.29■□□□□ 0.36
TUBP50607 FAM86GP-201ENST00000448322 971 ntBASIC17.29■□□□□ 0.36
TUBP50607 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC17.29■□□□□ 0.36
TUBP50607 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.29■□□□□ 0.36
TUBP50607 GATD1-206ENST00000526325 756 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBP50607 SLC25A39P2-201ENST00000537614 270 ntBASIC17.29■□□□□ 0.36
TUBP50607 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC17.29■□□□□ 0.36
TUBP50607 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBP50607 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBP50607 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TUBP50607 NARF-206ENST00000457415 1668 ntTSL 5 BASIC17.29■□□□□ 0.36
TUBP50607 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TUBP50607 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC17.29■□□□□ 0.36
TUBP50607 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC17.28■□□□□ 0.36
TUBP50607 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TUBP50607 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TUBP50607 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
TUBP50607 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.28■□□□□ 0.36
TUBP50607 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC17.28■□□□□ 0.36
TUBP50607 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC17.28■□□□□ 0.36
TUBP50607 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBP50607 AC142381.1-201ENST00000426099 345 ntBASIC17.28■□□□□ 0.36
TUBP50607 SPDYE14P-201ENST00000442619 822 ntBASIC17.28■□□□□ 0.36
TUBP50607 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
TUBP50607 AC069262.1-201ENST00000539058 672 ntBASIC17.28■□□□□ 0.36
TUBP50607 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.28■□□□□ 0.36
TUBP50607 AC106028.4-201ENST00000614509 607 ntBASIC17.28■□□□□ 0.36
TUBP50607 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms