Protein–RNA interactions for Protein: P48431

SOX2, Transcription factor SOX-2, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2P48431 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 AC073347.1-201ENST00000421633 2643 ntBASIC14.5□□□□□ -0.09
SOX2P48431 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SOX2P48431 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.5□□□□□ -0.09
SOX2P48431 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.5□□□□□ -0.09
SOX2P48431 NME3-204ENST00000563498 920 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 NKAPP1-205ENST00000585790 367 ntBASIC14.5□□□□□ -0.09
SOX2P48431 DBP-204ENST00000599385 709 ntTSL 3 BASIC14.5□□□□□ -0.09
SOX2P48431 SIGLEC29P-201ENST00000599873 1114 ntBASIC14.5□□□□□ -0.09
SOX2P48431 AC092119.3-201ENST00000612618 583 ntBASIC14.5□□□□□ -0.09
SOX2P48431 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC14.5□□□□□ -0.09
SOX2P48431 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.5□□□□□ -0.09
SOX2P48431 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SOX2P48431 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 AC126177.1-201ENST00000547829 2218 ntBASIC14.5□□□□□ -0.09
SOX2P48431 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SOX2P48431 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SOX2P48431 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.5□□□□□ -0.09
SOX2P48431 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC14.49□□□□□ -0.09
SOX2P48431 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
SOX2P48431 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.49□□□□□ -0.09
SOX2P48431 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 PAWRP1-201ENST00000451083 565 ntBASIC14.49□□□□□ -0.09
SOX2P48431 AC087163.2-201ENST00000457299 853 ntBASIC14.49□□□□□ -0.09
SOX2P48431 POU5F1P6-201ENST00000466990 990 ntBASIC14.49□□□□□ -0.09
SOX2P48431 LINC02447-202ENST00000501888 2146 ntBASIC14.49□□□□□ -0.09
SOX2P48431 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC14.49□□□□□ -0.09
SOX2P48431 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 TCF25-202ENST00000263347 2377 ntTSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 CDC14C-201ENST00000428251 1719 ntBASIC14.49□□□□□ -0.09
SOX2P48431 LINC01144-201ENST00000626198 1710 ntBASIC14.49□□□□□ -0.09
SOX2P48431 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.49□□□□□ -0.09
SOX2P48431 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC14.49□□□□□ -0.09
SOX2P48431 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SOX2P48431 AL513477.1-201ENST00000602865 2407 ntBASIC14.49□□□□□ -0.09
SOX2P48431 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 P3H1-202ENST00000296388 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC14.48□□□□□ -0.09
SOX2P48431 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
SOX2P48431 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
SOX2P48431 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC14.48□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms