Protein–RNA interactions for Protein: P48163

ME1, NADP-dependent malic enzyme, humanhuman

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ME1P48163 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
ME1P48163 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
ME1P48163 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC18.82■□□□□ 0.6
ME1P48163 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
ME1P48163 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ME1P48163 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC18.81■□□□□ 0.6
ME1P48163 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 CDC14C-201ENST00000428251 1719 ntBASIC18.81■□□□□ 0.6
ME1P48163 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.81■□□□□ 0.6
ME1P48163 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ME1P48163 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
ME1P48163 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 LINC02447-202ENST00000501888 2146 ntBASIC18.81■□□□□ 0.6
ME1P48163 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC18.81■□□□□ 0.6
ME1P48163 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
ME1P48163 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ME1P48163 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
ME1P48163 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
ME1P48163 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
ME1P48163 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
ME1P48163 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
ME1P48163 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
ME1P48163 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC18.81■□□□□ 0.6
ME1P48163 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
ME1P48163 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.8■□□□□ 0.6
ME1P48163 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ME1P48163 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ME1P48163 MED22-202ENST00000371999 987 ntTSL 3 BASIC18.8■□□□□ 0.6
ME1P48163 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.8■□□□□ 0.6
ME1P48163 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 MIR4515-201ENST00000584082 81 ntBASIC18.8■□□□□ 0.6
ME1P48163 AC117500.6-201ENST00000624871 588 ntBASIC18.8■□□□□ 0.6
ME1P48163 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 ATG9B-212ENST00000639579 4539 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.8■□□□□ 0.6
ME1P48163 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
ME1P48163 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ME1P48163 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
ME1P48163 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
ME1P48163 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
ME1P48163 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC18.79■□□□□ 0.6
ME1P48163 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC18.79■□□□□ 0.6
ME1P48163 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 FAM215A-202ENST00000632077 792 ntBASIC18.79■□□□□ 0.6
ME1P48163 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
ME1P48163 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC18.79■□□□□ 0.6
ME1P48163 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
ME1P48163 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
ME1P48163 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms