Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BRCC3P46736 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.36■□□□□ 0.37
BRCC3P46736 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.36■□□□□ 0.37
BRCC3P46736 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.36■□□□□ 0.37
BRCC3P46736 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC17.36■□□□□ 0.37
BRCC3P46736 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 AC009118.2-201ENST00000613275 655 ntBASIC17.36■□□□□ 0.37
BRCC3P46736 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
BRCC3P46736 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.36■□□□□ 0.37
BRCC3P46736 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 IMPDH1P4-201ENST00000445028 1534 ntBASIC17.36■□□□□ 0.37
BRCC3P46736 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
BRCC3P46736 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
BRCC3P46736 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC17.36■□□□□ 0.37
BRCC3P46736 NFIX-210ENST00000588228 1692 ntTSL 2 BASIC17.36■□□□□ 0.37
BRCC3P46736 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
BRCC3P46736 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 ALOX12P2-203ENST00000570921 1945 ntBASIC17.35■□□□□ 0.37
BRCC3P46736 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.35■□□□□ 0.37
BRCC3P46736 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BRCC3P46736 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BRCC3P46736 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC17.35■□□□□ 0.37
BRCC3P46736 COQ9-214ENST00000567933 882 ntTSL 3 BASIC17.35■□□□□ 0.37
BRCC3P46736 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.35■□□□□ 0.37
BRCC3P46736 PRR29-209ENST00000582540 967 ntTSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC17.35■□□□□ 0.37
BRCC3P46736 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BRCC3P46736 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
BRCC3P46736 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.35■□□□□ 0.37
BRCC3P46736 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
BRCC3P46736 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 AGGF1P2-201ENST00000426656 2106 ntBASIC17.35■□□□□ 0.37
BRCC3P46736 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
BRCC3P46736 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC17.35■□□□□ 0.37
BRCC3P46736 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 OR6D1P-203ENST00000641209 4860 ntBASIC17.34■□□□□ 0.37
BRCC3P46736 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
BRCC3P46736 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
BRCC3P46736 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 ASB12-201ENST00000362002 1289 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BRCC3P46736 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC17.34■□□□□ 0.37
BRCC3P46736 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC17.34■□□□□ 0.37
BRCC3P46736 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC17.34■□□□□ 0.37
BRCC3P46736 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
BRCC3P46736 GSAP-205ENST00000430584 600 ntTSL 5 BASIC17.34■□□□□ 0.37
BRCC3P46736 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 SPTLC1P1-201ENST00000447199 261 ntBASIC17.34■□□□□ 0.37
BRCC3P46736 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
BRCC3P46736 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 AC010336.2-201ENST00000564226 506 ntBASIC17.34■□□□□ 0.37
BRCC3P46736 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC17.34■□□□□ 0.37
BRCC3P46736 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.34■□□□□ 0.37
BRCC3P46736 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
BRCC3P46736 AC026979.3-201ENST00000607315 403 ntBASIC17.34■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms