Protein–RNA interactions for Protein: P45452

MMP13, Collagenase 3, humanhuman

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP13P45452 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
MMP13P45452 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
MMP13P45452 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MMP13P45452 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP13P45452 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP13P45452 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP13P45452 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP13P45452 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
MMP13P45452 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
MMP13P45452 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP13P45452 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.08■□□□□ 0.33
MMP13P45452 TTC29-202ENST00000398886 1729 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MMP13P45452 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP13P45452 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP13P45452 PC-214ENST00000628663 1470 ntTSL 5 BASIC17.08■□□□□ 0.32
MMP13P45452 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MMP13P45452 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP13P45452 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
MMP13P45452 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP13P45452 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
MMP13P45452 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
MMP13P45452 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP13P45452 MAL2-202ENST00000531508 892 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP13P45452 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.08■□□□□ 0.32
MMP13P45452 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC17.08■□□□□ 0.32
MMP13P45452 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.08■□□□□ 0.32
MMP13P45452 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.08■□□□□ 0.32
MMP13P45452 AC023141.13-201ENST00000604991 943 ntBASIC17.08■□□□□ 0.32
MMP13P45452 AC007064.4-201ENST00000637740 555 ntBASIC17.08■□□□□ 0.32
MMP13P45452 AL645728.2-201ENST00000641974 660 ntBASIC17.08■□□□□ 0.32
MMP13P45452 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
MMP13P45452 RAB22A-201ENST00000244040 8670 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP13P45452 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC17.08■□□□□ 0.32
MMP13P45452 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.08■□□□□ 0.32
MMP13P45452 SREBF1-201ENST00000261646 4178 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
MMP13P45452 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP13P45452 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MMP13P45452 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
MMP13P45452 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP13P45452 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC17.07■□□□□ 0.32
MMP13P45452 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
MMP13P45452 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
MMP13P45452 AQP6-205ENST00000618286 829 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP13P45452 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC17.07■□□□□ 0.32
MMP13P45452 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC17.07■□□□□ 0.32
MMP13P45452 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
MMP13P45452 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP13P45452 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC17.06■□□□□ 0.32
MMP13P45452 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 BCAR1-209ENST00000546196 1340 ntBASIC17.06■□□□□ 0.32
MMP13P45452 FBXL5-201ENST00000341285 3385 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 TSPY26P-202ENST00000565928 3884 ntBASIC17.06■□□□□ 0.32
MMP13P45452 AL671710.1-201ENST00000610245 2349 ntBASIC17.06■□□□□ 0.32
MMP13P45452 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 MIR574-201ENST00000385209 96 ntBASIC17.06■□□□□ 0.32
MMP13P45452 MIR940-201ENST00000401276 94 ntBASIC17.06■□□□□ 0.32
MMP13P45452 DDT-204ENST00000404092 805 ntTSL 3 BASIC17.06■□□□□ 0.32
MMP13P45452 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP13P45452 KRT18P58-201ENST00000527480 1120 ntBASIC17.06■□□□□ 0.32
MMP13P45452 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
MMP13P45452 AL031432.2-201ENST00000566714 459 ntBASIC17.06■□□□□ 0.32
MMP13P45452 AL928711.1-201ENST00000570165 459 ntBASIC17.06■□□□□ 0.32
MMP13P45452 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.06■□□□□ 0.32
MMP13P45452 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC17.06■□□□□ 0.32
MMP13P45452 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP13P45452 AC004877.2-201ENST00000623941 599 ntBASIC17.06■□□□□ 0.32
MMP13P45452 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 SNX33P1-201ENST00000592116 1762 ntBASIC17.06■□□□□ 0.32
MMP13P45452 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC17.06■□□□□ 0.32
MMP13P45452 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
MMP13P45452 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms