Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 CBR1-202ENST00000399191 838 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN9P43378 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN9P43378 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN9P43378 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN9P43378 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 AL592309.1-201ENST00000443127 649 ntBASIC17.01■□□□□ 0.31
PTPN9P43378 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN9P43378 AC069335.1-201ENST00000489972 472 ntBASIC17.01■□□□□ 0.31
PTPN9P43378 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
PTPN9P43378 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN9P43378 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN9P43378 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC17.01■□□□□ 0.31
PTPN9P43378 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN9P43378 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.01■□□□□ 0.31
PTPN9P43378 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
PTPN9P43378 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC17.01■□□□□ 0.31
PTPN9P43378 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
PTPN9P43378 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
PTPN9P43378 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC17■□□□□ 0.31
PTPN9P43378 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN9P43378 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17■□□□□ 0.31
PTPN9P43378 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC17■□□□□ 0.31
PTPN9P43378 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC17■□□□□ 0.31
PTPN9P43378 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 AC046158.3-201ENST00000624947 2558 ntBASIC17■□□□□ 0.31
PTPN9P43378 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC17■□□□□ 0.31
PTPN9P43378 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17■□□□□ 0.31
PTPN9P43378 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17■□□□□ 0.31
PTPN9P43378 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC17■□□□□ 0.31
PTPN9P43378 FAM220BP-201ENST00000377689 816 ntBASIC17■□□□□ 0.31
PTPN9P43378 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
PTPN9P43378 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC17■□□□□ 0.31
PTPN9P43378 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17■□□□□ 0.31
PTPN9P43378 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC17■□□□□ 0.31
PTPN9P43378 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17■□□□□ 0.31
PTPN9P43378 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17■□□□□ 0.31
PTPN9P43378 AC092865.5-201ENST00000545435 363 ntBASIC17■□□□□ 0.31
PTPN9P43378 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
PTPN9P43378 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
PTPN9P43378 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17■□□□□ 0.31
PTPN9P43378 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
PTPN9P43378 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN9P43378 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN9P43378 AL603832.2-201ENST00000566195 2125 ntBASIC16.99■□□□□ 0.31
PTPN9P43378 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN9P43378 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN9P43378 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN9P43378 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
PTPN9P43378 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN9P43378 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN9P43378 AP000344.2-201ENST00000512987 629 ntBASIC16.99■□□□□ 0.31
PTPN9P43378 AC061975.2-201ENST00000581722 295 ntBASIC16.99■□□□□ 0.31
PTPN9P43378 AC024267.1-201ENST00000582320 895 ntBASIC16.99■□□□□ 0.31
PTPN9P43378 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.99■□□□□ 0.31
PTPN9P43378 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.99■□□□□ 0.31
PTPN9P43378 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
PTPN9P43378 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms