Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 PMS2P4-201ENST00000412466 1052 ntBASIC15.13■□□□□ 0.01
SLC1A3P43003 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC1A3P43003 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC15.13■□□□□ 0.01
SLC1A3P43003 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 RPL18-209ENST00000550645 463 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 RPL18-214ENST00000552588 559 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC1A3P43003 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC1A3P43003 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC15.13■□□□□ 0.01
SLC1A3P43003 U1.21-201ENST00000580816 167 ntBASIC15.13■□□□□ 0.01
SLC1A3P43003 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 AC023141.13-201ENST00000604991 943 ntBASIC15.13■□□□□ 0.01
SLC1A3P43003 AC020765.3-201ENST00000613051 740 ntBASIC15.13■□□□□ 0.01
SLC1A3P43003 TMEM132D-202ENST00000422113 5776 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
SLC1A3P43003 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
SLC1A3P43003 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
SLC1A3P43003 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC15.13■□□□□ 0.01
SLC1A3P43003 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 ZNF259P1-201ENST00000407656 1365 ntBASIC15.12■□□□□ 0.01
SLC1A3P43003 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 LINC01144-201ENST00000626198 1710 ntBASIC15.12■□□□□ 0.01
SLC1A3P43003 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
SLC1A3P43003 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 DDT-204ENST00000404092 805 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC1A3P43003 LBH-204ENST00000406087 559 ntTSL 4 BASIC15.12■□□□□ 0.01
SLC1A3P43003 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC15.12■□□□□ 0.01
SLC1A3P43003 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC1A3P43003 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC1A3P43003 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC1A3P43003 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 RPL28-209ENST00000560055 670 ntTSL 3 BASIC15.12■□□□□ 0.01
SLC1A3P43003 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC15.12■□□□□ 0.01
SLC1A3P43003 AC021097.1-201ENST00000607902 574 ntBASIC15.12■□□□□ 0.01
SLC1A3P43003 AC064836.3-201ENST00000607928 673 ntBASIC15.12■□□□□ 0.01
SLC1A3P43003 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 PCGF3-213ENST00000620529 1899 ntBASIC15.12■□□□□ 0.01
SLC1A3P43003 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.12■□□□□ 0.01
SLC1A3P43003 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
SLC1A3P43003 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
SLC1A3P43003 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC15.11■□□□□ 0.01
SLC1A3P43003 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
SLC1A3P43003 ANKRD26P3-201ENST00000454044 2748 ntBASIC15.11■□□□□ 0.01
SLC1A3P43003 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC1A3P43003 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC1A3P43003 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
SLC1A3P43003 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
SLC1A3P43003 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC15.11■□□□□ 0.01
SLC1A3P43003 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC15.11■□□□□ 0.01
SLC1A3P43003 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC15.11■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms