Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC20.55■□□□□ 0.88
COL15A1P39059 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC20.55■□□□□ 0.88
COL15A1P39059 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
COL15A1P39059 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC20.55■□□□□ 0.88
COL15A1P39059 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC20.55■□□□□ 0.88
COL15A1P39059 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COL15A1P39059 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC20.55■□□□□ 0.88
COL15A1P39059 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.55■□□□□ 0.88
COL15A1P39059 RPSAP52-203ENST00000622976 1023 ntBASIC20.55■□□□□ 0.88
COL15A1P39059 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC20.55■□□□□ 0.88
COL15A1P39059 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
COL15A1P39059 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
COL15A1P39059 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
COL15A1P39059 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC20.55■□□□□ 0.88
COL15A1P39059 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL15A1P39059 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.54■□□□□ 0.88
COL15A1P39059 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC20.54■□□□□ 0.88
COL15A1P39059 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC20.54■□□□□ 0.88
COL15A1P39059 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC20.54■□□□□ 0.88
COL15A1P39059 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 MIR8072-201ENST00000614241 80 ntBASIC20.54■□□□□ 0.88
COL15A1P39059 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 H2AFY-202ENST00000312469 1859 ntTSL 5 BASIC20.54■□□□□ 0.88
COL15A1P39059 PCGF3-213ENST00000620529 1899 ntBASIC20.54■□□□□ 0.88
COL15A1P39059 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL15A1P39059 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC20.54■□□□□ 0.88
COL15A1P39059 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL15A1P39059 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL15A1P39059 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 CDC14C-201ENST00000428251 1719 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL15A1P39059 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 ANKRD19P-201ENST00000338192 862 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL15A1P39059 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.53■□□□□ 0.88
COL15A1P39059 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.53■□□□□ 0.88
COL15A1P39059 KRT223P-202ENST00000449164 1292 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 AC092658.1-201ENST00000505836 891 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC20.53■□□□□ 0.88
COL15A1P39059 RAB1B-202ENST00000527397 991 ntTSL 3 BASIC20.53■□□□□ 0.88
COL15A1P39059 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.53■□□□□ 0.88
COL15A1P39059 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.53■□□□□ 0.88
COL15A1P39059 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC20.53■□□□□ 0.88
COL15A1P39059 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC20.53■□□□□ 0.88
COL15A1P39059 COX11-210ENST00000639671 696 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC20.53■□□□□ 0.88
COL15A1P39059 CLK3P2-201ENST00000427566 1453 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL15A1P39059 LINC01144-201ENST00000626198 1710 ntBASIC20.53■□□□□ 0.88
COL15A1P39059 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.52■□□□□ 0.88
COL15A1P39059 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC20.52■□□□□ 0.88
COL15A1P39059 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC20.52■□□□□ 0.88
COL15A1P39059 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.52■□□□□ 0.88
COL15A1P39059 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL15A1P39059 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL15A1P39059 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL15A1P39059 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL15A1P39059 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC20.52■□□□□ 0.88
COL15A1P39059 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC20.52■□□□□ 0.88
COL15A1P39059 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC20.52■□□□□ 0.88
COL15A1P39059 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms