Protein–RNA interactions for Protein: P35236

PTPN7, Tyrosine-protein phosphatase non-receptor type 7, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7P35236 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
PTPN7P35236 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.94■□□□□ 0.3
PTPN7P35236 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
PTPN7P35236 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PTPN7P35236 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC16.94■□□□□ 0.3
PTPN7P35236 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN7P35236 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 KRT126P-201ENST00000549467 1181 ntBASIC16.93■□□□□ 0.3
PTPN7P35236 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN7P35236 AC145285.3-201ENST00000564603 959 ntBASIC16.93■□□□□ 0.3
PTPN7P35236 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 MED16-214ENST00000617672 554 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.93■□□□□ 0.3
PTPN7P35236 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC16.93■□□□□ 0.3
PTPN7P35236 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PTPN7P35236 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC16.93■□□□□ 0.3
PTPN7P35236 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN7P35236 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
PTPN7P35236 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 HMBOX1-212ENST00000558662 1765 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN7P35236 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN7P35236 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.92■□□□□ 0.3
PTPN7P35236 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 HAUS4P1-201ENST00000406739 1145 ntBASIC16.92■□□□□ 0.3
PTPN7P35236 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC16.92■□□□□ 0.3
PTPN7P35236 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.92■□□□□ 0.3
PTPN7P35236 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
PTPN7P35236 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 OVCH1-AS1-204ENST00000641955 5529 ntBASIC16.92■□□□□ 0.3
PTPN7P35236 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 HLA-A-201ENST00000376802 1334 ntBASIC16.92■□□□□ 0.3
PTPN7P35236 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.92■□□□□ 0.3
PTPN7P35236 PAUPAR-201ENST00000630360 2965 ntBASIC16.92■□□□□ 0.3
PTPN7P35236 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
PTPN7P35236 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms