Protein–RNA interactions for Protein: P30408

TM4SF1, Transmembrane 4 L6 family member 1, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1P30408 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.07■□□□□ 0.8
TM4SF1P30408 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
TM4SF1P30408 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF1P30408 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 MIR1247-201ENST00000408206 136 ntBASIC20.06■□□□□ 0.8
TM4SF1P30408 GPAA1P2-201ENST00000417923 928 ntBASIC20.06■□□□□ 0.8
TM4SF1P30408 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 KRT8P37-201ENST00000451609 1420 ntBASIC20.06■□□□□ 0.8
TM4SF1P30408 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 PFN1P12-201ENST00000455938 534 ntBASIC20.06■□□□□ 0.8
TM4SF1P30408 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF1P30408 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF1P30408 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF1P30408 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF1P30408 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC20.06■□□□□ 0.8
TM4SF1P30408 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC20.06■□□□□ 0.8
TM4SF1P30408 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC20.06■□□□□ 0.8
TM4SF1P30408 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC20.06■□□□□ 0.8
TM4SF1P30408 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC20.06■□□□□ 0.8
TM4SF1P30408 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
TM4SF1P30408 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.06■□□□□ 0.8
TM4SF1P30408 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
TM4SF1P30408 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC20.05■□□□□ 0.8
TM4SF1P30408 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.05■□□□□ 0.8
TM4SF1P30408 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.05■□□□□ 0.8
TM4SF1P30408 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC20.05■□□□□ 0.8
TM4SF1P30408 BAATP1-201ENST00000412284 1225 ntBASIC20.05■□□□□ 0.8
TM4SF1P30408 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC20.05■□□□□ 0.8
TM4SF1P30408 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.05■□□□□ 0.8
TM4SF1P30408 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC20.05■□□□□ 0.8
TM4SF1P30408 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC20.05■□□□□ 0.8
TM4SF1P30408 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC20.05■□□□□ 0.8
TM4SF1P30408 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC20.05■□□□□ 0.8
TM4SF1P30408 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC20.05■□□□□ 0.8
TM4SF1P30408 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.05■□□□□ 0.8
TM4SF1P30408 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.05■□□□□ 0.8
TM4SF1P30408 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
TM4SF1P30408 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC20.04■□□□□ 0.8
TM4SF1P30408 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
TM4SF1P30408 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 INTS4P2-202ENST00000614726 2019 ntBASIC20.04■□□□□ 0.8
TM4SF1P30408 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM4SF1P30408 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 AC026954.1-201ENST00000429771 1293 ntBASIC20.04■□□□□ 0.8
TM4SF1P30408 KRT18P64-201ENST00000434946 1219 ntBASIC20.04■□□□□ 0.8
TM4SF1P30408 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC20.04■□□□□ 0.8
TM4SF1P30408 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
TM4SF1P30408 C2orf69P2-201ENST00000562032 1123 ntBASIC20.04■□□□□ 0.8
TM4SF1P30408 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC20.04■□□□□ 0.8
TM4SF1P30408 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.04■□□□□ 0.8
TM4SF1P30408 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
TM4SF1P30408 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 MSTO2P-201ENST00000314835 1709 ntBASIC20.04■□□□□ 0.8
TM4SF1P30408 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC20.04■□□□□ 0.8
TM4SF1P30408 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.03■□□□□ 0.8
TM4SF1P30408 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TM4SF1P30408 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
TM4SF1P30408 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
TM4SF1P30408 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms