Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CD40P25942 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
CD40P25942 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.1□□□□□ -0.15
CD40P25942 U82695.1-201ENST00000635752 1889 ntBASIC14.1□□□□□ -0.15
CD40P25942 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 MITF-204ENST00000352241 4814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 P4HA2-201ENST00000166534 2230 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40P25942 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40P25942 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC14.1□□□□□ -0.15
CD40P25942 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.1□□□□□ -0.15
CD40P25942 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.1□□□□□ -0.15
CD40P25942 AL138828.2-201ENST00000615812 383 ntBASIC14.1□□□□□ -0.15
CD40P25942 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.1□□□□□ -0.15
CD40P25942 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
CD40P25942 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC14.1□□□□□ -0.15
CD40P25942 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 CETN4P-206ENST00000642099 2168 ntBASIC14.1□□□□□ -0.15
CD40P25942 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 RELA-227ENST00000615805 2236 ntTSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC14.1□□□□□ -0.15
CD40P25942 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
CD40P25942 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
CD40P25942 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
CD40P25942 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 AC022211.2-201ENST00000585075 2527 ntBASIC14.09□□□□□ -0.15
CD40P25942 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
CD40P25942 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 AC100757.3-201ENST00000622361 1406 ntBASIC14.09□□□□□ -0.15
CD40P25942 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC14.09□□□□□ -0.15
CD40P25942 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC14.09□□□□□ -0.15
CD40P25942 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.09□□□□□ -0.15
CD40P25942 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 GREM1-201ENST00000560677 623 ntTSL 4 BASIC14.09□□□□□ -0.15
CD40P25942 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.09□□□□□ -0.15
CD40P25942 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC14.09□□□□□ -0.15
CD40P25942 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.09□□□□□ -0.15
CD40P25942 AC061975.2-201ENST00000581722 295 ntBASIC14.09□□□□□ -0.15
CD40P25942 AL589739.1-201ENST00000607720 493 ntBASIC14.09□□□□□ -0.15
CD40P25942 AL590560.3-201ENST00000623350 461 ntBASIC14.09□□□□□ -0.15
CD40P25942 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC14.09□□□□□ -0.15
CD40P25942 SEMA5B-211ENST00000616742 4933 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
CD40P25942 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CD40P25942 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms