Protein–RNA interactions for Protein: P23763

VAMP1, Vesicle-associated membrane protein 1, humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1P23763 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC13.92□□□□□ -0.18
VAMP1P23763 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.92□□□□□ -0.18
VAMP1P23763 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC13.92□□□□□ -0.18
VAMP1P23763 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC13.92□□□□□ -0.18
VAMP1P23763 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 Z83836.1-201ENST00000624605 1642 ntBASIC13.92□□□□□ -0.18
VAMP1P23763 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 CDC14C-201ENST00000428251 1719 ntBASIC13.92□□□□□ -0.18
VAMP1P23763 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
VAMP1P23763 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 AC132938.5-201ENST00000624980 1813 ntBASIC13.92□□□□□ -0.18
VAMP1P23763 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
VAMP1P23763 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
VAMP1P23763 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
VAMP1P23763 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 REXO1L8P-201ENST00000604378 1897 ntBASIC13.91□□□□□ -0.18
VAMP1P23763 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC13.91□□□□□ -0.18
VAMP1P23763 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.91□□□□□ -0.18
VAMP1P23763 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 LCK-206ENST00000373564 2137 ntTSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 HARS-204ENST00000438307 1789 ntTSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
VAMP1P23763 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC13.91□□□□□ -0.18
VAMP1P23763 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
VAMP1P23763 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
VAMP1P23763 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.18
VAMP1P23763 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VAMP1P23763 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
VAMP1P23763 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC13.9□□□□□ -0.18
VAMP1P23763 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 AC013467.2-201ENST00000605472 835 ntBASIC13.9□□□□□ -0.18
VAMP1P23763 AL031432.5-201ENST00000641059 760 ntBASIC13.9□□□□□ -0.18
VAMP1P23763 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 CHGA-202ENST00000334654 1474 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
VAMP1P23763 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
VAMP1P23763 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms