Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 PKD2L2-205ENST00000508638 2333 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 AC016027.1-202ENST00000607927 1699 ntBASIC15.55■□□□□ 0.08
NCK1P16333 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 ACTR3-208ENST00000535589 1530 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.55■□□□□ 0.08
NCK1P16333 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 AC087163.2-201ENST00000457299 853 ntBASIC15.55■□□□□ 0.08
NCK1P16333 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC15.55■□□□□ 0.08
NCK1P16333 FAM86EP-206ENST00000510506 987 ntBASIC15.55■□□□□ 0.08
NCK1P16333 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 CYP2A7P1-201ENST00000595391 815 ntBASIC15.55■□□□□ 0.08
NCK1P16333 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 AC099336.1-202ENST00000602961 463 ntBASIC15.55■□□□□ 0.08
NCK1P16333 AP001269.4-201ENST00000609611 512 ntBASIC15.55■□□□□ 0.08
NCK1P16333 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.55■□□□□ 0.08
NCK1P16333 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
NCK1P16333 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.55■□□□□ 0.08
NCK1P16333 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
NCK1P16333 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 AC136621.1-201ENST00000624017 2304 ntBASIC15.54■□□□□ 0.08
NCK1P16333 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NCK1P16333 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC15.54■□□□□ 0.08
NCK1P16333 PRYP5-201ENST00000451909 266 ntBASIC15.54■□□□□ 0.08
NCK1P16333 AC104819.1-201ENST00000504587 486 ntBASIC15.54■□□□□ 0.08
NCK1P16333 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC15.54■□□□□ 0.08
NCK1P16333 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC15.54■□□□□ 0.08
NCK1P16333 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC15.54■□□□□ 0.08
NCK1P16333 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
NCK1P16333 AL139424.1-201ENST00000607572 797 ntBASIC15.54■□□□□ 0.08
NCK1P16333 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC15.54■□□□□ 0.08
NCK1P16333 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC15.54■□□□□ 0.08
NCK1P16333 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
NCK1P16333 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
NCK1P16333 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 FKRP-201ENST00000318584 3332 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 AP005117.1-201ENST00000584346 1413 ntBASIC15.53■□□□□ 0.08
NCK1P16333 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC15.53■□□□□ 0.08
NCK1P16333 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.53■□□□□ 0.08
NCK1P16333 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
NCK1P16333 BET1L-202ENST00000332865 533 ntTSL 5 BASIC15.53■□□□□ 0.08
NCK1P16333 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
NCK1P16333 RCN1P1-201ENST00000400413 996 ntBASIC15.53■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms