Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
BMP4P12644 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
BMP4P12644 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BMP4P12644 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC15.13■□□□□ 0.01
BMP4P12644 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BMP4P12644 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BMP4P12644 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
BMP4P12644 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC15.13■□□□□ 0.01
BMP4P12644 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
BMP4P12644 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
BMP4P12644 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC15.13■□□□□ 0.01
BMP4P12644 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
BMP4P12644 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 BX276092.7-203ENST00000637198 1536 ntBASIC15.12■□□□□ 0.01
BMP4P12644 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 SUPT20HL2-201ENST00000486479 2409 ntBASIC15.12■□□□□ 0.01
BMP4P12644 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
BMP4P12644 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 OR7E14P-202ENST00000530490 1290 ntBASIC15.12■□□□□ 0.01
BMP4P12644 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC15.12■□□□□ 0.01
BMP4P12644 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
BMP4P12644 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
BMP4P12644 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
BMP4P12644 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC15.12■□□□□ 0.01
BMP4P12644 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
BMP4P12644 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 POLL-206ENST00000370172 2308 ntTSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.11■□□□□ 0.01
BMP4P12644 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC15.11■□□□□ 0.01
BMP4P12644 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 KRT18P58-201ENST00000527480 1120 ntBASIC15.11■□□□□ 0.01
BMP4P12644 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC15.11■□□□□ 0.01
BMP4P12644 LITAF-211ENST00000572255 516 ntTSL 4 BASIC15.11■□□□□ 0.01
BMP4P12644 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
BMP4P12644 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 NFASC-205ENST00000403080 2462 ntTSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 AL645728.1-201ENST00000366221 2101 ntBASIC15.11■□□□□ 0.01
BMP4P12644 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 AC026748.1-201ENST00000624349 3251 ntBASIC15.11■□□□□ 0.01
BMP4P12644 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
BMP4P12644 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.11■□□□□ 0.01
BMP4P12644 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
BMP4P12644 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
BMP4P12644 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC15.1■□□□□ 0.01
BMP4P12644 ALG1-204ENST00000588623 2671 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
BMP4P12644 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
BMP4P12644 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms