Protein–RNA interactions for Protein: P10276

RARA, Retinoic acid receptor alpha, humanhuman

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARAP10276 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
RARAP10276 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RARAP10276 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RARAP10276 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
RARAP10276 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC17.23■□□□□ 0.35
RARAP10276 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.23■□□□□ 0.35
RARAP10276 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 AC007967.2-201ENST00000432613 625 ntBASIC17.23■□□□□ 0.35
RARAP10276 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC17.23■□□□□ 0.35
RARAP10276 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC17.23■□□□□ 0.35
RARAP10276 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.23■□□□□ 0.35
RARAP10276 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC17.23■□□□□ 0.35
RARAP10276 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC17.23■□□□□ 0.35
RARAP10276 AC018845.2-201ENST00000568326 409 ntBASIC17.23■□□□□ 0.35
RARAP10276 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 MIR3909-201ENST00000579518 119 ntBASIC17.23■□□□□ 0.35
RARAP10276 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 AC023141.13-201ENST00000604991 943 ntBASIC17.23■□□□□ 0.35
RARAP10276 AC007064.4-201ENST00000637740 555 ntBASIC17.23■□□□□ 0.35
RARAP10276 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
RARAP10276 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC17.23■□□□□ 0.35
RARAP10276 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
RARAP10276 AC104640.1-201ENST00000562617 2109 ntBASIC17.23■□□□□ 0.35
RARAP10276 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
RARAP10276 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.22■□□□□ 0.35
RARAP10276 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
RARAP10276 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 PMS2P4-201ENST00000412466 1052 ntBASIC17.22■□□□□ 0.35
RARAP10276 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.22■□□□□ 0.35
RARAP10276 SLC25A1P1-201ENST00000528351 927 ntBASIC17.22■□□□□ 0.35
RARAP10276 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC17.22■□□□□ 0.35
RARAP10276 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
RARAP10276 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
RARAP10276 AC021097.1-201ENST00000607902 574 ntBASIC17.22■□□□□ 0.35
RARAP10276 AC004877.2-201ENST00000623941 599 ntBASIC17.22■□□□□ 0.35
RARAP10276 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC17.22■□□□□ 0.35
RARAP10276 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC17.22■□□□□ 0.35
RARAP10276 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.22■□□□□ 0.35
RARAP10276 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC17.22■□□□□ 0.35
RARAP10276 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RARAP10276 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RARAP10276 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 AC025580.3-201ENST00000617932 1424 ntBASIC17.21■□□□□ 0.35
RARAP10276 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC17.21■□□□□ 0.35
RARAP10276 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
RARAP10276 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.21■□□□□ 0.35
RARAP10276 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC17.21■□□□□ 0.35
RARAP10276 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
RARAP10276 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
RARAP10276 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RARAP10276 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC17.21■□□□□ 0.35
RARAP10276 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.21■□□□□ 0.35
RARAP10276 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms