Protein–RNA interactions for Protein: P05166

PCCB, Propionyl-CoA carboxylase beta chain, mitochondrial, humanhuman

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCCBP05166 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.21■□□□□ 0.18
PCCBP05166 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
PCCBP05166 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
PCCBP05166 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.2■□□□□ 0.18
PCCBP05166 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCCBP05166 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
PCCBP05166 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
PCCBP05166 AC092580.3-201ENST00000430932 139 ntBASIC16.2■□□□□ 0.18
PCCBP05166 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.2■□□□□ 0.18
PCCBP05166 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC16.2■□□□□ 0.18
PCCBP05166 RNA5SP421-201ENST00000516864 134 ntBASIC16.2■□□□□ 0.18
PCCBP05166 AC027369.6-201ENST00000525520 931 ntBASIC16.2■□□□□ 0.18
PCCBP05166 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.2■□□□□ 0.18
PCCBP05166 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.2■□□□□ 0.18
PCCBP05166 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.2■□□□□ 0.18
PCCBP05166 NAA60-208ENST00000570819 833 ntTSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.2■□□□□ 0.18
PCCBP05166 INO80C-206ENST00000586489 594 ntTSL 3 BASIC16.2■□□□□ 0.18
PCCBP05166 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.2■□□□□ 0.18
PCCBP05166 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.2■□□□□ 0.18
PCCBP05166 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.2■□□□□ 0.18
PCCBP05166 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 AC005052.1-201ENST00000625181 2492 ntBASIC16.2■□□□□ 0.18
PCCBP05166 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
PCCBP05166 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.2■□□□□ 0.18
PCCBP05166 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC16.19■□□□□ 0.18
PCCBP05166 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.19■□□□□ 0.18
PCCBP05166 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.19■□□□□ 0.18
PCCBP05166 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC16.19■□□□□ 0.18
PCCBP05166 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 AL512638.1-201ENST00000457493 794 ntBASIC16.19■□□□□ 0.18
PCCBP05166 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC16.19■□□□□ 0.18
PCCBP05166 AC024267.1-201ENST00000582320 895 ntBASIC16.19■□□□□ 0.18
PCCBP05166 COQ4-205ENST00000609948 956 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.19■□□□□ 0.18
PCCBP05166 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.19■□□□□ 0.18
PCCBP05166 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.19■□□□□ 0.18
PCCBP05166 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.19■□□□□ 0.18
PCCBP05166 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.19■□□□□ 0.18
PCCBP05166 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 SLC9A2-201ENST00000233969 5410 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
PCCBP05166 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.18■□□□□ 0.18
PCCBP05166 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.18■□□□□ 0.18
PCCBP05166 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCCBP05166 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
PCCBP05166 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCCBP05166 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.18■□□□□ 0.18
PCCBP05166 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCCBP05166 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCCBP05166 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.18■□□□□ 0.18
PCCBP05166 ALOX12P2-203ENST00000570921 1945 ntBASIC16.18■□□□□ 0.18
PCCBP05166 KCNJ8-201ENST00000240662 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCCBP05166 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCCBP05166 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
PCCBP05166 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
PCCBP05166 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms