Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 RBM17P3-201ENST00000417687 1192 ntBASIC14.82□□□□□ -0.04
HLA-DPB1P04440 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 SIGLEC30P-201ENST00000455569 941 ntBASIC14.82□□□□□ -0.04
HLA-DPB1P04440 AF238378.1-201ENST00000526806 358 ntBASIC14.82□□□□□ -0.04
HLA-DPB1P04440 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 NKAPP1-205ENST00000585790 367 ntBASIC14.82□□□□□ -0.04
HLA-DPB1P04440 IRF5-214ENST00000613821 595 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 HARS-203ENST00000431330 1774 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 SLC3A2-204ENST00000377891 2222 ntTSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 AC097637.2-201ENST00000624096 1997 ntBASIC14.82□□□□□ -0.04
HLA-DPB1P04440 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 MIR600HG-201ENST00000449175 5984 ntBASIC14.82□□□□□ -0.04
HLA-DPB1P04440 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
HLA-DPB1P04440 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 AL450487.1-201ENST00000426799 995 ntBASIC14.81□□□□□ -0.04
HLA-DPB1P04440 SAPCD2P3-201ENST00000455031 850 ntBASIC14.81□□□□□ -0.04
HLA-DPB1P04440 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 AL355877.3-201ENST00000622820 899 ntBASIC14.81□□□□□ -0.04
HLA-DPB1P04440 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DPB1P04440 AL136379.1-201ENST00000623471 2642 ntBASIC14.8□□□□□ -0.04
HLA-DPB1P04440 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 PTRHD1-201ENST00000328379 1105 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 AP002414.1-201ENST00000391405 1147 ntBASIC14.8□□□□□ -0.04
HLA-DPB1P04440 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HLA-DPB1P04440 FGFR3P6-201ENST00000457012 610 ntBASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms