Protein–RNA interactions for Protein: P04350

TUBB4A, Tubulin beta-4A chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB4AP04350 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 ATP2C1-224ENST00000533801 3690 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 PPP1R18-206ENST00000615892 1448 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 API5-202ENST00000420461 2009 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC17.62■□□□□ 0.41
TUBB4AP04350 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC17.62■□□□□ 0.41
TUBB4AP04350 AC106881.1-201ENST00000605849 3329 ntBASIC17.62■□□□□ 0.41
TUBB4AP04350 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
TUBB4AP04350 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 GPI-205ENST00000586425 1799 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 AC232323.1-201ENST00000540724 2099 ntBASIC17.61■□□□□ 0.41
TUBB4AP04350 REXO1L5P-201ENST00000622260 2098 ntBASIC17.61■□□□□ 0.41
TUBB4AP04350 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 AC113347.1-201ENST00000413321 391 ntBASIC17.61■□□□□ 0.41
TUBB4AP04350 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.61■□□□□ 0.41
TUBB4AP04350 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 DUT-205ENST00000558813 769 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC17.61■□□□□ 0.41
TUBB4AP04350 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 UBC-206ENST00000538617 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 AL590787.1-201ENST00000568856 1315 ntBASIC17.61■□□□□ 0.41
TUBB4AP04350 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 POLL-206ENST00000370172 2308 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
TUBB4AP04350 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC17.61■□□□□ 0.41
TUBB4AP04350 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC17.61■□□□□ 0.41
TUBB4AP04350 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
TUBB4AP04350 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 PARN-202ENST00000420015 2360 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB4AP04350 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC17.6■□□□□ 0.41
TUBB4AP04350 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
TUBB4AP04350 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB4AP04350 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB4AP04350 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB4AP04350 TMPOP1-202ENST00000424642 1267 ntBASIC17.6■□□□□ 0.41
TUBB4AP04350 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.6■□□□□ 0.41
TUBB4AP04350 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.6■□□□□ 0.41
TUBB4AP04350 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.6■□□□□ 0.41
TUBB4AP04350 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.6■□□□□ 0.41
TUBB4AP04350 AC124864.1-201ENST00000623408 392 ntBASIC17.6■□□□□ 0.41
TUBB4AP04350 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC17.6■□□□□ 0.41
TUBB4AP04350 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 AC148477.5-201ENST00000625164 1645 ntBASIC17.6■□□□□ 0.41
TUBB4AP04350 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
TUBB4AP04350 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
TUBB4AP04350 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.6■□□□□ 0.41
TUBB4AP04350 AC004817.3-201ENST00000602957 2129 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms