Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 PC-214ENST00000628663 1470 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND1P03886 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 TLE1-202ENST00000376484 666 ntTSL 3 BASIC15.55■□□□□ 0.08
MT-ND1P03886 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MT-ND1P03886 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND1P03886 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND1P03886 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
MT-ND1P03886 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC15.55■□□□□ 0.08
MT-ND1P03886 CYB561-217ENST00000582997 877 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND1P03886 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND1P03886 TERC-201ENST00000602385 541 ntBASIC15.55■□□□□ 0.08
MT-ND1P03886 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 AC073592.4-201ENST00000623827 446 ntBASIC15.55■□□□□ 0.08
MT-ND1P03886 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.55■□□□□ 0.08
MT-ND1P03886 PHTF1-201ENST00000357783 2747 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.55■□□□□ 0.08
MT-ND1P03886 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
MT-ND1P03886 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
MT-ND1P03886 MAPK7-202ENST00000308406 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 ZFAND6-207ENST00000558494 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 KRT18P35-201ENST00000510488 1269 ntBASIC15.54■□□□□ 0.08
MT-ND1P03886 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 AC092119.3-201ENST00000612618 583 ntBASIC15.54■□□□□ 0.08
MT-ND1P03886 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC15.54■□□□□ 0.08
MT-ND1P03886 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 AC022532.1-201ENST00000624563 1728 ntBASIC15.54■□□□□ 0.08
MT-ND1P03886 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC15.54■□□□□ 0.08
MT-ND1P03886 AC079776.2-201ENST00000641154 1609 ntBASIC15.54■□□□□ 0.08
MT-ND1P03886 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
MT-ND1P03886 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
MT-ND1P03886 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MT-ND1P03886 ALDOA-226ENST00000569798 1499 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND1P03886 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND1P03886 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
MT-ND1P03886 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC15.53■□□□□ 0.08
MT-ND1P03886 NUS1P2-201ENST00000417358 873 ntBASIC15.53■□□□□ 0.08
MT-ND1P03886 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC15.53■□□□□ 0.08
MT-ND1P03886 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC15.53■□□□□ 0.08
MT-ND1P03886 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND1P03886 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.53■□□□□ 0.08
MT-ND1P03886 BID-213ENST00000615414 2236 ntTSL 5 BASIC15.53■□□□□ 0.08
MT-ND1P03886 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND1P03886 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
MT-ND1P03886 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
MT-ND1P03886 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.52■□□□□ 0.08
MT-ND1P03886 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
MT-ND1P03886 HARS-204ENST00000438307 1789 ntTSL 2 BASIC15.52■□□□□ 0.08
MT-ND1P03886 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC15.52■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms