Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 AC087641.1-201ENST00000557561 1021 ntBASIC14.81□□□□□ -0.04
HLA-DQA2P01906 CYP2A7P1-201ENST00000595391 815 ntBASIC14.81□□□□□ -0.04
HLA-DQA2P01906 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 ADAMTS14-202ENST00000373208 5269 ntAPPRIS P4 TSL 2 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 AC129492.6-201ENST00000611383 1305 ntBASIC14.81□□□□□ -0.04
HLA-DQA2P01906 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 SGSH-201ENST00000326317 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
HLA-DQA2P01906 AFDN-203ENST00000366806 5962 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 STARD13-205ENST00000439831 945 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 RNPS1P1-201ENST00000507437 918 ntBASIC14.8□□□□□ -0.04
HLA-DQA2P01906 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 AC005412.3-201ENST00000580309 715 ntBASIC14.8□□□□□ -0.04
HLA-DQA2P01906 BSG-214ENST00000614867 960 ntTSL 3 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 AC046158.3-201ENST00000624947 2558 ntBASIC14.8□□□□□ -0.04
HLA-DQA2P01906 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 MTHFR-217ENST00000641820 1569 ntBASIC14.8□□□□□ -0.04
HLA-DQA2P01906 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 PCGF3-213ENST00000620529 1899 ntBASIC14.8□□□□□ -0.04
HLA-DQA2P01906 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 RCAN3-210ENST00000618490 2386 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
HLA-DQA2P01906 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 IPPK-202ENST00000375522 882 ntTSL 3 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
HLA-DQA2P01906 SLC22A20-204ENST00000530038 1673 ntBASIC14.79□□□□□ -0.04
HLA-DQA2P01906 TOLLIP-AS1-201ENST00000530897 939 ntBASIC14.79□□□□□ -0.04
HLA-DQA2P01906 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms