Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.01■□□□□ 0.47
CD4P01730 UBL7-209ENST00000567435 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CD4P01730 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CD4P01730 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18■□□□□ 0.47
CD4P01730 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CD4P01730 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CD4P01730 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC18■□□□□ 0.47
CD4P01730 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC18■□□□□ 0.47
CD4P01730 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC18■□□□□ 0.47
CD4P01730 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18■□□□□ 0.47
CD4P01730 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC18■□□□□ 0.47
CD4P01730 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC18■□□□□ 0.47
CD4P01730 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
CD4P01730 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC18■□□□□ 0.47
CD4P01730 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC18■□□□□ 0.47
CD4P01730 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC18■□□□□ 0.47
CD4P01730 AC026979.3-201ENST00000607315 403 ntBASIC18■□□□□ 0.47
CD4P01730 AC093726.1-201ENST00000608064 963 ntBASIC18■□□□□ 0.47
CD4P01730 AL033527.4-201ENST00000641026 673 ntBASIC18■□□□□ 0.47
CD4P01730 AL391256.1-201ENST00000443260 1855 ntBASIC18■□□□□ 0.47
CD4P01730 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
CD4P01730 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CD4P01730 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.99■□□□□ 0.47
CD4P01730 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CD4P01730 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC17.99■□□□□ 0.47
CD4P01730 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC17.99■□□□□ 0.47
CD4P01730 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CD4P01730 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC17.99■□□□□ 0.47
CD4P01730 AL606495.2-201ENST00000605867 535 ntBASIC17.99■□□□□ 0.47
CD4P01730 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 AL160035.1-201ENST00000637583 576 ntTSL 4 BASIC17.99■□□□□ 0.47
CD4P01730 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.99■□□□□ 0.47
CD4P01730 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CD4P01730 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.99■□□□□ 0.47
CD4P01730 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CD4P01730 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.99■□□□□ 0.47
CD4P01730 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
CD4P01730 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 FADS2-205ENST00000517839 469 ntTSL 3 BASIC17.98■□□□□ 0.47
CD4P01730 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC17.98■□□□□ 0.47
CD4P01730 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
CD4P01730 AP005482.1-201ENST00000563722 1273 ntBASIC17.98■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms