Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 AC068472.1-201ENST00000474589 881 ntBASIC13.03□□□□□ -0.32
IFNA1P01562 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 REXO1L10P-201ENST00000615707 1290 ntBASIC13.03□□□□□ -0.32
IFNA1P01562 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 REXO1L12P-201ENST00000622156 912 ntBASIC13.03□□□□□ -0.32
IFNA1P01562 AC073912.3-201ENST00000624414 853 ntBASIC13.03□□□□□ -0.32
IFNA1P01562 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 AC020658.6-201ENST00000623564 1870 ntBASIC13.03□□□□□ -0.32
IFNA1P01562 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 TRIP10-201ENST00000313244 2153 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC13.03□□□□□ -0.32
IFNA1P01562 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC13.03□□□□□ -0.32
IFNA1P01562 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
IFNA1P01562 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.02□□□□□ -0.32
IFNA1P01562 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
IFNA1P01562 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
IFNA1P01562 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
IFNA1P01562 SETD1B-202ENST00000542440 8185 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.32
IFNA1P01562 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC13.02□□□□□ -0.32
IFNA1P01562 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
IFNA1P01562 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.02□□□□□ -0.32
IFNA1P01562 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
IFNA1P01562 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
IFNA1P01562 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
IFNA1P01562 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
IFNA1P01562 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 AC007967.3-201ENST00000434308 558 ntBASIC13.02□□□□□ -0.33
IFNA1P01562 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC13.02□□□□□ -0.33
IFNA1P01562 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC13.02□□□□□ -0.33
IFNA1P01562 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
IFNA1P01562 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC13.02□□□□□ -0.33
IFNA1P01562 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC13.02□□□□□ -0.33
IFNA1P01562 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
IFNA1P01562 AC104771.1-201ENST00000603335 964 ntBASIC13.02□□□□□ -0.33
IFNA1P01562 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC13.02□□□□□ -0.33
IFNA1P01562 CPEB1-211ENST00000615198 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC13.02□□□□□ -0.33
IFNA1P01562 AC073648.6-201ENST00000641589 218 ntBASIC13.02□□□□□ -0.33
IFNA1P01562 CNTNAP3P2-201ENST00000617175 3861 ntBASIC13.02□□□□□ -0.33
IFNA1P01562 CLEC18A-201ENST00000288040 2155 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
IFNA1P01562 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC13.02□□□□□ -0.33
IFNA1P01562 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.02□□□□□ -0.33
IFNA1P01562 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC13.02□□□□□ -0.33
IFNA1P01562 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
IFNA1P01562 REXO1L8P-201ENST00000604378 1897 ntBASIC13.02□□□□□ -0.33
IFNA1P01562 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC13.01□□□□□ -0.33
IFNA1P01562 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
IFNA1P01562 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
IFNA1P01562 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.01□□□□□ -0.33
IFNA1P01562 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms