Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRUB2O95900 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRUB2O95900 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRUB2O95900 CNN2P11-201ENST00000429351 262 ntBASIC17.17■□□□□ 0.34
TRUB2O95900 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 PRYP6-201ENST00000514804 343 ntBASIC17.17■□□□□ 0.34
TRUB2O95900 IGHV3-62-201ENST00000520057 340 ntBASIC17.17■□□□□ 0.34
TRUB2O95900 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRUB2O95900 QPRT-203ENST00000562473 579 ntTSL 3 BASIC17.17■□□□□ 0.34
TRUB2O95900 SNHG9-202ENST00000564014 471 ntBASIC17.17■□□□□ 0.34
TRUB2O95900 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC17.17■□□□□ 0.34
TRUB2O95900 AC004835.2-201ENST00000603762 682 ntBASIC17.17■□□□□ 0.34
TRUB2O95900 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC17.17■□□□□ 0.34
TRUB2O95900 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRUB2O95900 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRUB2O95900 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRUB2O95900 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRUB2O95900 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRUB2O95900 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC17.17■□□□□ 0.34
TRUB2O95900 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.17■□□□□ 0.34
TRUB2O95900 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 ARHGEF25-202ENST00000333972 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
TRUB2O95900 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 AC069335.1-201ENST00000489972 472 ntBASIC17.16■□□□□ 0.34
TRUB2O95900 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.16■□□□□ 0.34
TRUB2O95900 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC17.16■□□□□ 0.34
TRUB2O95900 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC17.16■□□□□ 0.34
TRUB2O95900 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 AP001160.2-201ENST00000596071 487 ntBASIC17.16■□□□□ 0.34
TRUB2O95900 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
TRUB2O95900 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.16■□□□□ 0.34
TRUB2O95900 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRUB2O95900 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRUB2O95900 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.15■□□□□ 0.34
TRUB2O95900 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 AC005237.2-201ENST00000434368 219 ntBASIC17.15■□□□□ 0.34
TRUB2O95900 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRUB2O95900 KRT8P23-201ENST00000560090 1207 ntBASIC17.15■□□□□ 0.34
TRUB2O95900 AC093520.2-201ENST00000561830 333 ntBASIC17.15■□□□□ 0.34
TRUB2O95900 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 AC073389.1-201ENST00000595595 795 ntBASIC17.15■□□□□ 0.34
TRUB2O95900 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC17.15■□□□□ 0.34
TRUB2O95900 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TRUB2O95900 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
TRUB2O95900 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC17.15■□□□□ 0.34
TRUB2O95900 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms