Protein–RNA interactions for Protein: O15417

TNRC18, Trinucleotide repeat-containing gene 18 protein, humanhuman

Predicted RBP Predictions only

Length 2,968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC18O15417 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNRC18O15417 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNRC18O15417 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TNRC18O15417 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNRC18O15417 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNRC18O15417 RPL18A-201ENST00000222247 665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TNRC18O15417 SLC16A6P1-201ENST00000413214 1059 ntBASIC17.33■□□□□ 0.37
TNRC18O15417 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC17.33■□□□□ 0.37
TNRC18O15417 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
TNRC18O15417 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC17.33■□□□□ 0.37
TNRC18O15417 AC012044.1-201ENST00000603431 297 ntBASIC17.33■□□□□ 0.37
TNRC18O15417 AC093813.1-201ENST00000605066 256 ntBASIC17.33■□□□□ 0.37
TNRC18O15417 AL353622.2-201ENST00000605846 425 ntBASIC17.33■□□□□ 0.37
TNRC18O15417 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC17.33■□□□□ 0.36
TNRC18O15417 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
TNRC18O15417 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.33■□□□□ 0.36
TNRC18O15417 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC17.33■□□□□ 0.36
TNRC18O15417 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNRC18O15417 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.33■□□□□ 0.36
TNRC18O15417 FRMD8P1-201ENST00000440433 1524 ntBASIC17.33■□□□□ 0.36
TNRC18O15417 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNRC18O15417 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.33■□□□□ 0.36
TNRC18O15417 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC17.33■□□□□ 0.36
TNRC18O15417 CD59-210ENST00000528700 652 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
TNRC18O15417 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
TNRC18O15417 TMCO5B-205ENST00000530020 894 ntBASIC17.33■□□□□ 0.36
TNRC18O15417 NME1-NME2-203ENST00000555572 1193 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
TNRC18O15417 LINC02332-201ENST00000557232 386 ntTSL 3 BASIC17.33■□□□□ 0.36
TNRC18O15417 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNRC18O15417 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
TNRC18O15417 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC17.32■□□□□ 0.36
TNRC18O15417 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.32■□□□□ 0.36
TNRC18O15417 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 C1orf53-201ENST00000367393 588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
TNRC18O15417 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.32■□□□□ 0.36
TNRC18O15417 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 MUTYH-211ENST00000456914 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 HIST1H1D-201ENST00000244534 666 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
TNRC18O15417 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC17.32■□□□□ 0.36
TNRC18O15417 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TNRC18O15417 ENPP7P8-202ENST00000527856 1345 ntBASIC17.32■□□□□ 0.36
TNRC18O15417 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
TNRC18O15417 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
TNRC18O15417 AC011742.3-201ENST00000439053 820 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC17.31■□□□□ 0.36
TNRC18O15417 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TNRC18O15417 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TNRC18O15417 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.31■□□□□ 0.36
TNRC18O15417 AC009264.1-206ENST00000592183 534 ntTSL 4 BASIC17.31■□□□□ 0.36
TNRC18O15417 AL627230.2-201ENST00000613254 655 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 AC242376.2-201ENST00000619355 883 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 AC132938.4-201ENST00000623835 848 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TNRC18O15417 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 GSTT2B-201ENST00000290765 1099 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 OR9I1-201ENST00000302610 945 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
TNRC18O15417 PPIE-202ENST00000356511 1079 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
TNRC18O15417 HLA-DPA2-205ENST00000433582 733 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC17.31■□□□□ 0.36
TNRC18O15417 IGHEP1-201ENST00000521393 651 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 AC242376.1-201ENST00000559033 726 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 AC020922.3-201ENST00000595064 547 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 AL161773.1-201ENST00000624845 863 ntBASIC17.31■□□□□ 0.36
TNRC18O15417 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.31■□□□□ 0.36
TNRC18O15417 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TNRC18O15417 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.3■□□□□ 0.36
TNRC18O15417 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC17.3■□□□□ 0.36
TNRC18O15417 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
TNRC18O15417 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
TNRC18O15417 ALG1L6P-201ENST00000515248 758 ntBASIC17.3■□□□□ 0.36
TNRC18O15417 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC17.3■□□□□ 0.36
TNRC18O15417 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
TNRC18O15417 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.3■□□□□ 0.36
TNRC18O15417 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC17.3■□□□□ 0.36
TNRC18O15417 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TNRC18O15417 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC17.3■□□□□ 0.36
TNRC18O15417 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms