Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
ATP2A1O14983 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 AP001094.4-201ENST00000579008 2176 ntBASIC18.68■□□□□ 0.58
ATP2A1O14983 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 ACRV1-201ENST00000315608 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 AL139010.1-201ENST00000454878 894 ntBASIC18.68■□□□□ 0.58
ATP2A1O14983 RN7SL692P-201ENST00000464677 288 ntBASIC18.68■□□□□ 0.58
ATP2A1O14983 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2A1O14983 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2A1O14983 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC18.68■□□□□ 0.58
ATP2A1O14983 AL132655.2-201ENST00000596276 594 ntBASIC18.68■□□□□ 0.58
ATP2A1O14983 SRP9-204ENST00000619790 377 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC18.68■□□□□ 0.58
ATP2A1O14983 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.68■□□□□ 0.58
ATP2A1O14983 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC18.68■□□□□ 0.58
ATP2A1O14983 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
ATP2A1O14983 AC105020.1-201ENST00000435356 2205 ntBASIC18.68■□□□□ 0.58
ATP2A1O14983 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 AC007541.1-201ENST00000570282 1469 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
ATP2A1O14983 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
ATP2A1O14983 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC18.67■□□□□ 0.58
ATP2A1O14983 DFFBP1-201ENST00000433250 979 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 RASL12-203ENST00000434605 982 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A1O14983 AC244107.1-201ENST00000442033 332 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 PUDP-206ENST00000540122 825 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A1O14983 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 AL365330.1-201ENST00000607459 531 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 ACSM2B-211ENST00000567001 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC18.67■□□□□ 0.58
ATP2A1O14983 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 IMPDH1P4-201ENST00000445028 1534 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 STRADA-254ENST00000640999 2336 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 AL391825.1-201ENST00000457671 1364 ntBASIC18.67■□□□□ 0.58
ATP2A1O14983 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
ATP2A1O14983 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
ATP2A1O14983 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC18.66■□□□□ 0.58
ATP2A1O14983 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
ATP2A1O14983 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
ATP2A1O14983 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms