Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 AL021920.2-201ENST00000624828 1351 ntBASIC17.21■□□□□ 0.35
SOX1O00570 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC17.21■□□□□ 0.35
SOX1O00570 SYCN-201ENST00000318438 573 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.21■□□□□ 0.35
SOX1O00570 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 AC093724.1-201ENST00000448659 1027 ntBASIC17.21■□□□□ 0.35
SOX1O00570 PPOX-204ENST00000462866 473 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX1O00570 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 ZNF528-AS1-202ENST00000596746 929 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX1O00570 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.21■□□□□ 0.35
SOX1O00570 METTL26-214ENST00000614890 801 ntTSL 3 BASIC17.21■□□□□ 0.35
SOX1O00570 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX1O00570 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.21■□□□□ 0.35
SOX1O00570 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SOX1O00570 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.21■□□□□ 0.35
SOX1O00570 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SOX1O00570 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SOX1O00570 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
SOX1O00570 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
SOX1O00570 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC17.21■□□□□ 0.34
SOX1O00570 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX1O00570 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
SOX1O00570 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 SFT2D2-202ENST00000367829 491 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX1O00570 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 FO393414.2-201ENST00000405153 598 ntBASIC17.2■□□□□ 0.34
SOX1O00570 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 COX5BP1-201ENST00000507622 393 ntBASIC17.2■□□□□ 0.34
SOX1O00570 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX1O00570 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX1O00570 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX1O00570 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX1O00570 CFL1-206ENST00000527344 962 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC17.2■□□□□ 0.34
SOX1O00570 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC17.2■□□□□ 0.34
SOX1O00570 AC025279.2-201ENST00000569730 653 ntBASIC17.2■□□□□ 0.34
SOX1O00570 RN7SL574P-201ENST00000581512 297 ntBASIC17.2■□□□□ 0.34
SOX1O00570 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.2■□□□□ 0.34
SOX1O00570 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
SOX1O00570 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC17.2■□□□□ 0.34
SOX1O00570 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SOX1O00570 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.19■□□□□ 0.34
SOX1O00570 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
SOX1O00570 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.19■□□□□ 0.34
SOX1O00570 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.19■□□□□ 0.34
SOX1O00570 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.19■□□□□ 0.34
SOX1O00570 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 LINC00304-203ENST00000565008 1864 ntBASIC17.19■□□□□ 0.34
SOX1O00570 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SOX1O00570 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SOX1O00570 MIR1227-201ENST00000408484 88 ntBASIC17.19■□□□□ 0.34
SOX1O00570 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX1O00570 RPL13P2-201ENST00000440687 659 ntBASIC17.19■□□□□ 0.34
SOX1O00570 PGAM1P5-201ENST00000548011 764 ntBASIC17.19■□□□□ 0.34
SOX1O00570 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
SOX1O00570 AC138951.2-201ENST00000623455 1161 ntBASIC17.19■□□□□ 0.34
SOX1O00570 AC011491.1-203ENST00000637688 543 ntBASIC17.19■□□□□ 0.34
SOX1O00570 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX1O00570 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC17.19■□□□□ 0.34
SOX1O00570 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
SOX1O00570 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.34
SOX1O00570 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
SOX1O00570 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms