Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
CDC7O00311 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC7O00311 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.12■□□□□ 0.17
CDC7O00311 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.12■□□□□ 0.17
CDC7O00311 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC16.12■□□□□ 0.17
CDC7O00311 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
CDC7O00311 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
CDC7O00311 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC16.11■□□□□ 0.17
CDC7O00311 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDC7O00311 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC7O00311 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC7O00311 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC16.11■□□□□ 0.17
CDC7O00311 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.11■□□□□ 0.17
CDC7O00311 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 RELA-227ENST00000615805 2236 ntTSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 AC016027.1-202ENST00000607927 1699 ntBASIC16.11■□□□□ 0.17
CDC7O00311 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
CDC7O00311 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC16.11■□□□□ 0.17
CDC7O00311 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
CDC7O00311 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
CDC7O00311 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDC7O00311 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
CDC7O00311 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 PARVB-210ENST00000619710 1530 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC16.1■□□□□ 0.17
CDC7O00311 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDC7O00311 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.1■□□□□ 0.17
CDC7O00311 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC16.1■□□□□ 0.17
CDC7O00311 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 AL513190.1-201ENST00000621254 727 ntBASIC16.1■□□□□ 0.17
CDC7O00311 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
CDC7O00311 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
CDC7O00311 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.1■□□□□ 0.17
CDC7O00311 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
CDC7O00311 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 EFR3B-203ENST00000402191 3685 ntTSL 5 BASIC16.09■□□□□ 0.17
CDC7O00311 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
CDC7O00311 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 BEX3-201ENST00000361298 921 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.09■□□□□ 0.17
CDC7O00311 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC16.09■□□□□ 0.17
CDC7O00311 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.09■□□□□ 0.17
CDC7O00311 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
CDC7O00311 HS6ST1P1-201ENST00000481504 1234 ntBASIC16.09■□□□□ 0.17
CDC7O00311 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms