Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.09■□□□□ 0.33
CCDC188H7C350 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CCDC188H7C350 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC188H7C350 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.08■□□□□ 0.33
CCDC188H7C350 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC188H7C350 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC188H7C350 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC188H7C350 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC17.08■□□□□ 0.33
CCDC188H7C350 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CCDC188H7C350 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC188H7C350 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC188H7C350 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC17.08■□□□□ 0.32
CCDC188H7C350 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 MSRA-206ENST00000521209 814 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC188H7C350 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC17.08■□□□□ 0.32
CCDC188H7C350 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 BCL10-202ENST00000620248 774 ntTSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CCDC188H7C350 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.32
CCDC188H7C350 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 AC022613.1-201ENST00000536835 2530 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 SSFA2-202ENST00000409001 4987 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 HNF1B-207ENST00000621123 1971 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CCDC188H7C350 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
CCDC188H7C350 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.07■□□□□ 0.32
CCDC188H7C350 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC17.07■□□□□ 0.32
CCDC188H7C350 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CCDC188H7C350 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CCDC188H7C350 AC006486.2-201ENST00000624246 2199 ntBASIC17.06■□□□□ 0.32
CCDC188H7C350 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC188H7C350 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.06■□□□□ 0.32
CCDC188H7C350 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 AL160237.2-201ENST00000556165 472 ntBASIC17.06■□□□□ 0.32
CCDC188H7C350 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 NME3-204ENST00000563498 920 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 RNF151-202ENST00000569210 853 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CCDC188H7C350 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC17.06■□□□□ 0.32
CCDC188H7C350 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
CCDC188H7C350 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms