Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC13.37□□□□□ -0.27
LINC00473A8K010 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
LINC00473A8K010 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
LINC00473A8K010 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 MGAT1-201ENST00000307826 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
LINC00473A8K010 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 BANP-201ENST00000286122 2368 ntTSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AL596257.1-201ENST00000641463 2694 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 PMS2P4-201ENST00000412466 1052 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AC098831.1-202ENST00000438821 336 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC13.36□□□□□ -0.27
LINC00473A8K010 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AL031432.2-201ENST00000566714 459 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 AL928711.1-201ENST00000570165 459 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 MIR3909-201ENST00000579518 119 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 RN7SL510P-201ENST00000581311 263 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AL773604.1-201ENST00000617417 272 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 AL645728.2-201ENST00000641974 660 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 CARD11-203ENST00000396946 4366 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
LINC00473A8K010 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
LINC00473A8K010 U82695.1-201ENST00000635752 1889 ntBASIC13.36□□□□□ -0.27
LINC00473A8K010 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
LINC00473A8K010 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00473A8K010 IGLL3P-201ENST00000412472 434 ntBASIC13.35□□□□□ -0.27
LINC00473A8K010 VMO1-203ENST00000416307 712 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 AL031284.1-201ENST00000419297 478 ntBASIC13.35□□□□□ -0.27
LINC00473A8K010 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
LINC00473A8K010 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC13.35□□□□□ -0.27
LINC00473A8K010 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
LINC00473A8K010 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
LINC00473A8K010 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms