Protein–RNA interactions for Protein: A0A5B6

TCRBV3S1, T-cell receptor beta variable 28 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV3S1A0A5B6 AC114341.1-201ENST00000618070 349 ntBASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AC105250.1-201ENST00000509378 2057 ntBASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
TCRBV3S1A0A5B6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 AL353732.1-201ENST00000569618 1459 ntBASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 CHCHD2P8-201ENST00000429873 447 ntBASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 MINOS1P3-201ENST00000457048 203 ntBASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 AC064862.7-201ENST00000604520 867 ntBASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 AC112693.3-201ENST00000624819 1983 ntBASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
TCRBV3S1A0A5B6 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 RFX1-201ENST00000254325 4332 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 RBSN-204ENST00000449050 903 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 RPS15-207ENST00000591032 550 ntTSL 3 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 GPS1-208ENST00000578552 1874 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
TCRBV3S1A0A5B6 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms