Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 AP001889.1-201ENST00000525414 633 ntBASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
LOC102724428A0A0B4J2F2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 GGT3P-204ENST00000453783 1664 ntBASIC20.58■□□□□ 0.88
LOC102724428A0A0B4J2F2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 SLC2A6-202ENST00000371899 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 BCYRN1-201ENST00000418539 200 ntBASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL139289.2-201ENST00000424948 661 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 GCK-202ENST00000345378 2421 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 MSC-AS1-208ENST00000522519 1537 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC20.57■□□□□ 0.88
LOC102724428A0A0B4J2F2 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC108725.1-201ENST00000495472 409 ntBASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC068587.3-201ENST00000526613 355 ntBASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC124283.3-201ENST00000570869 594 ntBASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC244093.1-201ENST00000610837 814 ntBASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC018470.1-201ENST00000624790 3129 ntBASIC20.56■□□□□ 0.88
LOC102724428A0A0B4J2F2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 MRPL55-201ENST00000295008 632 ntAPPRIS P1 TSL 2 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 PKIG-203ENST00000372887 769 ntTSL 3 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 FAM21FP-201ENST00000426241 1131 ntBASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 TARDBPP1-201ENST00000442013 1203 ntBASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 AP000812.2-201ENST00000538934 718 ntBASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 ENPP7P5-201ENST00000541031 1031 ntBASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 PTP4A1P2-201ENST00000546033 454 ntBASIC20.55■□□□□ 0.88
LOC102724428A0A0B4J2F2 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms