Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AP005117.1-202ENST00000581724 1908 ntBASIC18.73■□□□□ 0.59
CLIC4Q9Y696 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AC093724.1-201ENST00000448659 1027 ntBASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AC109635.5-201ENST00000533593 962 ntBASIC18.73■□□□□ 0.59
CLIC4Q9Y696 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 CD63-210ENST00000550776 870 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 MBP-202ENST00000355994 2772 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 ACE-203ENST00000413513 2237 ntTSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC18.73■□□□□ 0.59
CLIC4Q9Y696 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 PRAL-201ENST00000624952 3286 ntBASIC18.72■□□□□ 0.59
CLIC4Q9Y696 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 VILL-207ENST00000465644 1857 ntTSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 U82695.1-201ENST00000635752 1889 ntBASIC18.72■□□□□ 0.59
CLIC4Q9Y696 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 CRCP-205ENST00000431089 942 ntTSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 RPL13AP23-201ENST00000480739 586 ntBASIC18.72■□□□□ 0.59
CLIC4Q9Y696 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 KRT19P2-202ENST00000557173 1012 ntBASIC18.72■□□□□ 0.59
CLIC4Q9Y696 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 AL121894.2-201ENST00000602977 491 ntBASIC18.72■□□□□ 0.59
CLIC4Q9Y696 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 AC007064.4-201ENST00000637740 555 ntBASIC18.72■□□□□ 0.59
CLIC4Q9Y696 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLIC4Q9Y696 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CLIC4Q9Y696 AC016027.1-202ENST00000607927 1699 ntBASIC18.71■□□□□ 0.59
CLIC4Q9Y696 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms