Protein–RNA interactions for Protein: Q9Y5F9

PCDHGB6, Protocadherin gamma-B6, humanhuman

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB6Q9Y5F9 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB6Q9Y5F9 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PCDHGB6Q9Y5F9 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PCDHGB6Q9Y5F9 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB6Q9Y5F9 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.58■□□□□ 0.09
PCDHGB6Q9Y5F9 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PCDHGB6Q9Y5F9 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AC002056.1-201ENST00000395613 760 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 METTL21AP1-201ENST00000438852 635 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 HYPK-202ENST00000442995 1051 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AP002490.2-201ENST00000524791 560 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AL513210.1-201ENST00000629608 234 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AC092902.6-201ENST00000641783 218 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 TUBB8P12-201ENST00000308911 1335 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 TUBB7P-202ENST00000428444 1305 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 TUBB8P7-204ENST00000567960 1332 ntBASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PCDHGB6Q9Y5F9 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 MX1-210ENST00000455164 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 CYP51A1P2-201ENST00000419457 1499 ntBASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 FRMD8P1-201ENST00000440433 1524 ntBASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
PCDHGB6Q9Y5F9 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
PCDHGB6Q9Y5F9 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms