Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 AC006058.4-201ENST00000624016 1670 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 AC067930.6-201ENST00000623257 4947 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 NUS1P2-201ENST00000417358 873 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 FAM86EP-206ENST00000510506 987 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 AC099336.1-202ENST00000602961 463 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 AC116407.4-201ENST00000623319 1061 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 AP001350.2-201ENST00000625104 1094 ntBASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 PAK2-201ENST00000327134 6139 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC11.47□□□□□ -0.57
UBE2D4Q9Y2X8 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 SLC22A20-204ENST00000530038 1673 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AL353732.1-201ENST00000569618 1459 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PPT1-215ENST00000641471 2368 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 RCN1P1-201ENST00000400413 996 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PMS2P1-201ENST00000431037 1228 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AP000867.3-201ENST00000524675 377 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AC012615.1-201ENST00000565797 1299 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AL591684.3-201ENST00000605187 298 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AP001269.4-201ENST00000609611 512 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 AL139288.1-201ENST00000623748 933 ntBASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
UBE2D4Q9Y2X8 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
UBE2D4Q9Y2X8 AC016027.1-202ENST00000607927 1699 ntBASIC11.46□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms