Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 MIR943-201ENST00000401286 94 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 KLF2P3-201ENST00000451977 1087 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 AC125807.1-201ENST00000483097 614 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 AC026150.2-201ENST00000564693 1156 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 AC004771.3-201ENST00000574260 551 ntTSL 4 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 MIR4745-201ENST00000577608 62 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 MPDU1-223ENST00000582151 728 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 AL390955.2-201ENST00000603032 514 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 AL391256.1-201ENST00000443260 1855 ntBASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
NPIPA1Q9UND3 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 AL035633.1-201ENST00000406139 838 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 AC055876.3-201ENST00000431496 288 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 INGX-202ENST00000489074 768 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 TMEM161B-AS1-202ENST00000501715 1101 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 SLC25A39P2-201ENST00000537614 270 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 AC051619.7-201ENST00000568314 623 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 AC138649.4-201ENST00000612222 287 ntBASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 SLC5A2-201ENST00000330498 2271 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 HNRNPH3-202ENST00000354695 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
NPIPA1Q9UND3 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
NPIPA1Q9UND3 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms