Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 FAM220BP-201ENST00000377689 816 ntBASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 KRT18P32-201ENST00000424695 1287 ntBASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SNHG9-202ENST00000564014 471 ntBASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 AL365330.1-201ENST00000607459 531 ntBASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PCDHA4Q9UN74 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 AASDHPPT-201ENST00000278618 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 SP100-205ENST00000409824 1802 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 RPS8P6-201ENST00000426177 609 ntBASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 AC023141.5-201ENST00000458585 616 ntBASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.7■□□□□ 0.58
PCDHA4Q9UN74 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 GPS2P2-201ENST00000430745 888 ntBASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 AC027612.4-201ENST00000605371 583 ntBASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 AC009093.7-201ENST00000623853 1223 ntBASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PCDHA4Q9UN74 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms