Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AC092580.3-201ENST00000430932 139 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 POLD4-211ENST00000539074 714 ntTSL 3 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AF228730.6-201ENST00000641497 218 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AC084121.3-201ENST00000641716 218 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AC105233.6-201ENST00000642093 218 ntBASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.56■□□□□ 0.56
HDAC6Q9UBN7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 CHGA-201ENST00000216492 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 AC006449.5-201ENST00000610658 2098 ntBASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 TERF1P3-201ENST00000505638 1227 ntBASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 MTFR1L-218ENST00000526894 733 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 ABR-203ENST00000536794 2213 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
HDAC6Q9UBN7 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AC132872.4-202ENST00000622924 2756 ntBASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AC092068.3-201ENST00000587894 2016 ntBASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 PCDHB17P-201ENST00000539533 2393 ntBASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 WBP2-203ENST00000433525 928 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AL512638.1-201ENST00000457493 794 ntBASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 LINC02560-201ENST00000596379 459 ntBASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 YTHDF3-AS1-201ENST00000603538 718 ntBASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 STX3-203ENST00000529177 1571 ntTSL 2 BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
HDAC6Q9UBN7 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 65.1 ms