Protein–RNA interactions for Protein: Q9P035

HACD3, Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase 3, humanhuman

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3Q9P035 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 ME2P1-201ENST00000426028 1970 ntBASIC16.64■□□□□ 0.25
HACD3Q9P035 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
HACD3Q9P035 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 AC023274.1-201ENST00000418278 595 ntBASIC16.64■□□□□ 0.25
HACD3Q9P035 MCCD1P2-201ENST00000423228 335 ntBASIC16.64■□□□□ 0.25
HACD3Q9P035 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 C11orf74-203ENST00000446510 1062 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.64■□□□□ 0.25
HACD3Q9P035 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC16.64■□□□□ 0.25
HACD3Q9P035 AP002472.1-201ENST00000577490 586 ntBASIC16.64■□□□□ 0.25
HACD3Q9P035 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 AC063926.3-201ENST00000624734 5658 ntBASIC16.64■□□□□ 0.25
HACD3Q9P035 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.64■□□□□ 0.25
HACD3Q9P035 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
HACD3Q9P035 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
HACD3Q9P035 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 FBP1-201ENST00000375326 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.63■□□□□ 0.25
HACD3Q9P035 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.63■□□□□ 0.25
HACD3Q9P035 POU5F1P6-201ENST00000466990 990 ntBASIC16.63■□□□□ 0.25
HACD3Q9P035 KRT18P34-201ENST00000488218 1270 ntBASIC16.63■□□□□ 0.25
HACD3Q9P035 CFL1-202ENST00000524553 860 ntTSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.63■□□□□ 0.25
HACD3Q9P035 HNRNPDL-206ENST00000602300 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 AL671883.3-201ENST00000603274 991 ntBASIC16.63■□□□□ 0.25
HACD3Q9P035 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
HACD3Q9P035 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
HACD3Q9P035 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
HACD3Q9P035 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.63■□□□□ 0.25
HACD3Q9P035 CSNK1A1L-201ENST00000379800 2406 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
HACD3Q9P035 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.62■□□□□ 0.25
HACD3Q9P035 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
HACD3Q9P035 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.62■□□□□ 0.25
HACD3Q9P035 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.62■□□□□ 0.25
HACD3Q9P035 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
HACD3Q9P035 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 AP000347.1-202ENST00000435868 847 ntBASIC16.62■□□□□ 0.25
HACD3Q9P035 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
HACD3Q9P035 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC16.62■□□□□ 0.25
HACD3Q9P035 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms