Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 CNN2P11-201ENST00000429351 262 ntBASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 SP100-205ENST00000409824 1802 ntTSL 5 BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
ECHDC1Q9NTX5 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 PTK7-202ENST00000230419 4272 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 DOC2GP-204ENST00000639052 2548 ntBASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 KRT18P32-201ENST00000424695 1287 ntBASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 SNHG9-202ENST00000564014 471 ntBASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 AL365330.1-201ENST00000607459 531 ntBASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 AL596442.2-201ENST00000610240 980 ntBASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 AC139530.3-201ENST00000620344 690 ntBASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 ARHGAP22-201ENST00000249601 2751 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
ECHDC1Q9NTX5 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 C14orf93-202ENST00000341470 2221 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 FAM220BP-201ENST00000377689 816 ntBASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 GPS2P2-201ENST00000430745 888 ntBASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 BANP-204ENST00000393208 2283 ntTSL 2 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 MAP4K3-202ENST00000341681 4271 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
ECHDC1Q9NTX5 UCKL1-201ENST00000354216 1837 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 RPS8P6-201ENST00000426177 609 ntBASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AL109613.1-202ENST00000427243 639 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC19.92■□□□□ 0.78
ECHDC1Q9NTX5 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms