Protein–RNA interactions for Protein: Q9NRR3

CDC42SE2, CDC42 small effector protein 2, humanhuman

Predictions only

Length 84 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2Q9NRR3 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 SLC9A3P2-201ENST00000447821 2021 ntBASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 AL592424.1-201ENST00000563624 1536 ntBASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
CDC42SE2Q9NRR3 PRAL-201ENST00000624952 3286 ntBASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AC006504.4-201ENST00000592118 1568 ntBASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 LSM5-204ENST00000409909 740 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 AC006557.2-201ENST00000592985 1240 ntBASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 PGM5P2-202ENST00000637225 1043 ntBASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 RFPL2-203ENST00000400237 2407 ntAPPRIS P3 TSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
CDC42SE2Q9NRR3 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC11.33□□□□□ -0.59
CDC42SE2Q9NRR3 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC11.33□□□□□ -0.59
CDC42SE2Q9NRR3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC11.33□□□□□ -0.59
CDC42SE2Q9NRR3 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PER1-201ENST00000317276 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TRIM46-211ENST00000611379 3082 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 AC005622.1-201ENST00000636801 1703 ntBASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 CCDC8-201ENST00000307522 3213 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 MRNIP-201ENST00000292586 1238 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
CDC42SE2Q9NRR3 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC11.33□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms