Protein–RNA interactions for Protein: Q9NRJ7

PCDHB16, Protocadherin beta-16, humanhuman

Predictions only

Length 776 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB16Q9NRJ7 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 NUS1P2-201ENST00000417358 873 ntBASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 HCG4P8-203ENST00000443049 980 ntBASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 AL589182.2-201ENST00000619332 1049 ntBASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 AL139288.1-201ENST00000623748 933 ntBASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
PCDHB16Q9NRJ7 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 R3HDM2P2-201ENST00000401880 2116 ntBASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 RBM17P3-201ENST00000417687 1192 ntBASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 FICD-205ENST00000552758 603 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 CYB561-217ENST00000582997 877 ntTSL 5 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 AC092119.3-201ENST00000612618 583 ntBASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 ME2P1-201ENST00000426028 1970 ntBASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
PCDHB16Q9NRJ7 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AC002310.6-201ENST00000624451 1377 ntBASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
PCDHB16Q9NRJ7 AC092171.3-201ENST00000610122 2651 ntBASIC14.35□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms