Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.96□□□□□ -0.02
CHD8Q9HCK8 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.02
CHD8Q9HCK8 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.02
CHD8Q9HCK8 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC14.96□□□□□ -0.02
CHD8Q9HCK8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
CHD8Q9HCK8 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 TNFSF11-201ENST00000239849 911 ntTSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 CD8B2-202ENST00000417670 633 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AL138731.1-201ENST00000452624 739 ntTSL 3 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 CEP164P1-201ENST00000455142 418 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AC069208.1-205ENST00000456299 576 ntTSL 4 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 RN7SL596P-201ENST00000582123 288 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 WIZP1-201ENST00000531444 2299 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AC087741.1-202ENST00000573346 801 ntTSL 3 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 RN7SL774P-201ENST00000577467 290 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AC100757.4-201ENST00000626934 759 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 AC020931.1-201ENST00000589622 1346 ntBASIC14.95□□□□□ -0.02
CHD8Q9HCK8 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
CHD8Q9HCK8 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 RERG-209ENST00000546331 1383 ntTSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 FAM197Y7-201ENST00000432892 766 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 FGFR3P1-201ENST00000449999 601 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 HOMER2P2-201ENST00000451621 847 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AL022344.2-201ENST00000568976 968 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AC007663.3-201ENST00000609632 465 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 ZNF514-201ENST00000295208 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AC108860.2-201ENST00000562760 2183 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 SNX15-201ENST00000352068 771 ntTSL 5 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AC097065.1-201ENST00000425737 517 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 FBXO24-204ENST00000465843 957 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 RPL18P13-201ENST00000478088 569 ntBASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 AIPL1-211ENST00000576776 1190 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 HTR4-213ENST00000631296 1224 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
CHD8Q9HCK8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 FAU-202ENST00000434372 533 ntTSL 2 BASIC14.93□□□□□ -0.02
CHD8Q9HCK8 Z97180.1-201ENST00000445173 988 ntBASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms