Protein–RNA interactions for Protein: Q9HC36

MRM3, rRNA methyltransferase 3, mitochondrial, humanhuman

Known RBP Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRM3Q9HC36 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.41■□□□□ 0.22
MRM3Q9HC36 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRM3Q9HC36 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRM3Q9HC36 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRM3Q9HC36 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRM3Q9HC36 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 SUPT20HL2-201ENST00000486479 2409 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 PPP6R1-201ENST00000412770 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 AC105917.1-201ENST00000506637 2539 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 SMAGP-202ENST00000398453 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 RNA5SP416-201ENST00000516838 111 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 AC002347.1-201ENST00000569543 541 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 AC027601.4-201ENST00000611259 610 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 FAM197Y3-203ENST00000618346 717 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 PMS2P7-201ENST00000506558 1336 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MRM3Q9HC36 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MRM3Q9HC36 AL589702.1-201ENST00000641229 1509 ntBASIC16.4■□□□□ 0.22
MRM3Q9HC36 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
MRM3Q9HC36 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.22
MRM3Q9HC36 ACE-203ENST00000413513 2237 ntTSL 2 BASIC16.39■□□□□ 0.22
MRM3Q9HC36 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 PRYP6-201ENST00000514804 343 ntBASIC16.39■□□□□ 0.21
MRM3Q9HC36 AC112191.1-201ENST00000523689 701 ntBASIC16.39■□□□□ 0.21
MRM3Q9HC36 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 AL513190.1-201ENST00000621254 727 ntBASIC16.39■□□□□ 0.21
MRM3Q9HC36 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 SLC39A1-203ENST00000368621 2398 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 AC010491.1-201ENST00000563101 2797 ntBASIC16.39■□□□□ 0.21
MRM3Q9HC36 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MRM3Q9HC36 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MRM3Q9HC36 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 AC008894.3-201ENST00000624324 3103 ntBASIC16.38■□□□□ 0.21
MRM3Q9HC36 CXADR-201ENST00000284878 6254 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC16.38■□□□□ 0.21
MRM3Q9HC36 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MRM3Q9HC36 HAUS4P1-201ENST00000406739 1145 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms